ENSDARG00000036164


Danio rerio

Features
Gene ID: ENSDARG00000036164
  
Biological name :cars
  
Synonyms : cars / cysteinyl-tRNA synthetase
  
Possible biological names infered from orthology : Cysteine--tRNA ligase, cytoplasmic / P49589 / Q9ER72
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 31796237
Gene end: 31831044
  
Corresponding Affymetrix probe sets: Dr.18334.1.A1_at (Zebrafish Array)   Dr.24192.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000052513
Ensembl peptide - ENSDARP00000112444
NCBI entrez gene - 368284     See in Manteia.
RefSeq - NM_001118900
RefSeq - XM_005168859
RefSeq Peptide - NP_001112372
swissprot - E7FGP2
swissprot - E7FDV9
ZFIN ID - ZDB-GENE-030328-29
Ensembl - ENSDARG00000036164
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CARSENSGALG00000006427Gallus gallus
 CARSENSG00000110619Homo sapiens
 CarsENSMUSG00000010755Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cars2 / cysteinyl-tRNA synthetase 2, mitochondrial / Q9HA77* / cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)*ENSDARG0000007854623


Protein motifs (from Interpro)
Interpro ID Name
 IPR009080  Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
 IPR010987  Glutathione S-transferase, C-terminal-like
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold
 IPR015803  Cysteine-tRNA ligase
 IPR024909  Cysteinyl-tRNA synthetase/mycothiol ligase
 IPR032678  tRNA synthetases class I, catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006423 cysteinyl-tRNA aminoacylation IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004817 cysteine-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000076 swim bladder swim bladder aplastic , abnormal
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 ZFA:0000084 yolk yolk increased size , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut quality , abnormal
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 ZFA:0000217 inner ear inner ear decreased size , abnormal
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 ZFA:0001094 whole organism whole organism decreased size , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0005223 lateral larval melanophore stripe lateral larval melanophore stripe melanocyte decreased amount , abnormal
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 ZFA:0005277 skeletal muscle skeletal muscle degenerate , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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