ENSGALG00000006906


Gallus gallus

Features
Gene ID: ENSGALG00000006906
  
Biological name :CHM
  
Synonyms : CHM / rab proteins geranylgeranyltransferase component A 1
  
Possible biological names infered from orthology : CHML / CHM like, Rab escort protein 2 / CHM, Rab escort protein 1 / choroideremia-like / choroidermia (RAB escort protein 1) / P24386 / P26374
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 8597733
Gene end: 8666449
  
Corresponding Affymetrix probe sets: Gga.12560.1.S1_s_at (Chicken Array)   GgaAffx.12151.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049340
Ensembl peptide - ENSGALP00000049847
NCBI entrez gene - 422266     See in Manteia.
RefSeq - NM_001031119
RefSeq Peptide - NP_001026290
swissprot - A0A1D5PAT3
swissprot - A0A1D5P9D9
Ensembl - ENSGALG00000006906
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chmENSDARG00000003845Danio rerio
 CHMENSG00000188419Homo sapiens
 CHMLENSG00000203668Homo sapiens
 ChmENSMUSG00000025531Mus musculus
 ChmlENSMUSG00000078185Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GDI2 / rab GDP dissociation inhibitor beta / P50395* / Q61598* / GDP dissociation inhibitor 2*ENSGALG0000000816916


Protein motifs (from Interpro)
Interpro ID Name
 IPR001738  Rab protein geranylgeranyltransferase component A
 IPR018203  GDP dissociation inhibitor
 IPR023753  FAD/NAD(P)-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0007264 small GTPase mediated signal transduction IEA
 biological_processGO:0018344 protein geranylgeranylation IEA
 biological_processGO:0050790 regulation of catalytic activity IEA
 cellular_componentGO:0005968 Rab-protein geranylgeranyltransferase complex IEA
 molecular_functionGO:0005092 GDP-dissociation inhibitor activity IEA


Pathways (from Reactome)
Pathway description
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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