ENSGALG00000007237


Gallus gallus

Features
Gene ID: ENSGALG00000007237
  
Biological name :ALYREF
  
Synonyms : ALYREF / Aly/REF export factor
  
Possible biological names infered from orthology : Alyref2 / Gm20765 / Gm21293 / Gm21304 / Gm21312 / Gm4301 / Gm4302 / Gm4303 / Gm4305 / Gm4307 / Gm4312 / Gm4340 / Gm6763 / Gm8764 / O08583 / RNA and export factor-binding protein 2-like / THO complex subunit 4
  
Species: Gallus gallus
  
Chr. number: 18
Strand: -1
Band:
Gene start: 10031892
Gene end: 10036686
  
Corresponding Affymetrix probe sets: Gga.1903.1.S1_at (Chicken Array)   Gga.1903.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011696
Ensembl peptide - ENSGALP00000063390
NCBI entrez gene - 769169     See in Manteia.
RefSeq - NM_001277907
RefSeq Peptide - NP_001264836
swissprot - E1C2L5
swissprot - A0A1L1RX23
Ensembl - ENSGALG00000007237
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 alyrefENSDARG00000077732Danio rerio
 ALYREFENSG00000183684Homo sapiens
 AlyrefENSMUSG00000025134Mus musculus
 Alyref2ENSMUSG00000060244Mus musculus
 Gm20765ENSMUSG00000095022Mus musculus
 Gm21293ENSMUSG00000091779Mus musculus
 Gm21304ENSMUSG00000097550Mus musculus
 Gm21312ENSMUSG00000094144Mus musculus
 Gm4301ENSMUSG00000094314Mus musculus
 Gm4302ENSMUSG00000091101Mus musculus
 Gm4303ENSMUSG00000112931Mus musculus
 Gm4305ENSMUSG00000112856Mus musculus
 Gm4307ENSMUSG00000096744Mus musculus
 Gm4312ENSMUSG00000096640Mus musculus
 Gm4340ENSMUSG00000090854Mus musculus
 Gm6763ENSMUSG00000097427Mus musculus
 Gm8764ENSMUSG00000097878Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR025715  Chromatin target of PRMT1 protein, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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