ENSMUSG00000090854


Mus musculus

Features
Gene ID: ENSMUSG00000090854
  
Biological name :Gm4340
  
Synonyms : Gm4340
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: D1
Gene start: 104194042
Gene end: 104196522
  
Corresponding Affymetrix probe sets: 10366180 (MoGene1.0st)   1443961_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000130793
Ensembl peptide - ENSMUSP00000137824
Ensembl peptide - ENSMUSP00000137984
NCBI entrez gene - 100043292     See in Manteia.
MGI - MGI:3782524
RefSeq - XM_017313746
RefSeq - NM_001177535
RefSeq Peptide - NP_001171006
swissprot - L7N2C4
swissprot - M0QWS9
Ensembl - ENSMUSG00000090854
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 alyrefENSDARG00000077732Danio rerio
 ALYREFENSGALG00000007237Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm6763ENSMUSG0000009742799
Gm21312ENSMUSG0000009414499
Gm20765ENSMUSG0000009502299
Gm8764ENSMUSG0000009787899
Gm21304 / RNA and export factor-binding protein 2-like ENSMUSG0000009755097
Gm21293 / RNA and export factor-binding protein 2-like ENSMUSG0000009177994
Gm4305ENSMUSG0000011285687
Gm4301ENSMUSG0000009431487
Gm4312ENSMUSG0000009664087
Gm4307ENSMUSG0000009674487
Gm4303ENSMUSG0000011293187
Gm4302ENSMUSG0000009110187
Alyref / O08583 / THO complex subunit 4 / Aly/REF export factor*ENSMUSG0000002513465
Alyref2 / ALYREF* / Aly/REF export factor*ENSMUSG0000006024460


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR032675  Leucine-rich repeat domain superfamily
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr