ENSGALG00000007476


Gallus gallus

Features
Gene ID: ENSGALG00000007476
  
Biological name :VAMP7
  
Synonyms : Q5ZL74 / VAMP7 / Vesicle-associated membrane protein 7
  
Possible biological names infered from orthology : P51809
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 11229010
Gene end: 11246791
  
Corresponding Affymetrix probe sets: Gga.17893.1.A1_at (Chicken Array)   Gga.17893.1.S1_at (Chicken Array)   Gga.2356.1.S1_at (Chicken Array)   Gga.2356.2.S1_at (Chicken Array)   GgaAffx.11963.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000031702
Ensembl peptide - ENSGALP00000049925
Ensembl peptide - ENSGALP00000059872
Ensembl peptide - ENSGALP00000064059
Ensembl peptide - ENSGALP00000064069
NCBI entrez gene - 422297     See in Manteia.
RefSeq - XM_015278289
RefSeq - NM_001031121
RefSeq - XM_015278287
RefSeq - XM_015278288
RefSeq - XM_015278285
RefSeq - XM_015278286
RefSeq Peptide - NP_001026292
swissprot - Q5ZL74
Ensembl - ENSGALG00000007476
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sybl1ENSDARG00000030775Danio rerio
 VAMP7ENSG00000124333Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001388  Synaptobrevin
 IPR010908  Longin domain
 IPR011012  Longin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport ISS
 biological_processGO:0006897 endocytosis IBA
 biological_processGO:0006906 vesicle fusion ISS
 biological_processGO:0006911 phagocytosis, engulfment ISS
 biological_processGO:0008333 endosome to lysosome transport ISS
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport ISS
 biological_processGO:0017156 calcium ion regulated exocytosis ISS
 biological_processGO:0035493 SNARE complex assembly IEA
 biological_processGO:0043001 Golgi to plasma membrane protein transport IEA
 biological_processGO:0043308 eosinophil degranulation ISS
 biological_processGO:0043312 neutrophil degranulation ISS
 biological_processGO:0043320 natural killer cell degranulation IEA
 biological_processGO:0050775 positive regulation of dendrite morphogenesis IEA
 biological_processGO:1900483 regulation of protein targeting to vacuolar membrane IEA
 biological_processGO:1903595 positive regulation of histamine secretion by mast cell IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane ISS
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane ISS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005802 trans-Golgi network IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030027 lamellipodium IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030133 transport vesicle IEA
 cellular_componentGO:0030141 secretory granule IEA
 cellular_componentGO:0030658 transport vesicle membrane IEA
 cellular_componentGO:0030667 secretory granule membrane IEA
 cellular_componentGO:0030670 phagocytic vesicle membrane IEA
 cellular_componentGO:0031091 platelet alpha granule IEA
 cellular_componentGO:0031143 pseudopodium IEA
 cellular_componentGO:0031201 SNARE complex ISS
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0031902 late endosome membrane ISS
 cellular_componentGO:0035577 azurophil granule membrane IEA
 cellular_componentGO:0043005 neuron projection ISS
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0045177 apical part of cell IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045335 phagocytic vesicle ISS
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
Lysosome Vesicle Biogenesis
Golgi Associated Vesicle Biogenesis
Cargo recognition for clathrin-mediated endocytosis
Clathrin-mediated endocytosis
Interleukin-12 signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000003052 AGFG1 / ArfGAP with FG repeats 1 / P52594* / Q8K2K6* / Arf-GAP domain and FG repeat-containing protein 1 *  / complex / reaction






 

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