ENSGALG00000007652


Gallus gallus

Features
Gene ID: ENSGALG00000007652
  
Biological name :SUCLG2
  
Synonyms : succinate-CoA ligase GDP-forming beta subunit / SUCLG2
  
Possible biological names infered from orthology : Q96I99 / Q9Z2I8 / Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 14765179
Gene end: 14867145
  
Corresponding Affymetrix probe sets: Gga.2557.1.S1_at (Chicken Array)   GgaAffx.12000.1.S1_at (Chicken Array)   GgaAffx.20374.1.S1_at (Chicken Array)   GgaAffx.20374.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000059276
Ensembl peptide - ENSGALP00000012380
NCBI entrez gene - 416087     See in Manteia.
RefSeq - NM_001006141
RefSeq Peptide - NP_001006141
swissprot - Q5ZL37
swissprot - A0A1L1RKI8
Ensembl - ENSGALG00000007652
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 suclg2ENSDARG00000044914Danio rerio
 Q96I99ENSG00000172340Homo sapiens
 Q9Z2I8ENSMUSG00000061838Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SUCLA2 / succinate-CoA ligase ADP-forming beta subunit / Q9P2R7* / Q9Z2I9* / Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial *ENSGALG0000001699348


Protein motifs (from Interpro)
Interpro ID Name
 IPR005809  Succinate--CoA synthetase, beta subunit
 IPR005811  ATP-citrate lyase/succinyl-CoA ligase
 IPR011761  ATP-grasp fold
 IPR013650  ATP-grasp fold, succinyl-CoA synthetase-type
 IPR013815  ATP-grasp fold, subdomain 1
 IPR016102  Succinyl-CoA synthetase-like
 IPR017866  Succinyl-CoA synthetase, beta subunit, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006099 tricarboxylic acid cycle IEA
 biological_processGO:0006104 succinyl-CoA metabolic process IEA
 biological_processGO:0008152 metabolic process IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005886 plasma membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004775 succinate-CoA ligase (ADP-forming) activity IEA
 molecular_functionGO:0004776 succinate-CoA ligase (GDP-forming) activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Citric acid cycle (TCA cycle)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000015961 SUCLG1 / succinate-CoA ligase alpha subunit / P53597* / Q9WUM5* / Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial *  / complex






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr