ENSGALG00000008195


Gallus gallus

Features
Gene ID: ENSGALG00000008195
  
Biological name :NPHP1
  
Synonyms : nephrocystin 1 / NPHP1
  
Possible biological names infered from orthology : nephronophthisis 1 (juvenile) homolog (human) / O15259
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 3072065
Gene end: 3091482
  
Corresponding Affymetrix probe sets: Gga.18268.1.S1_at (Chicken Array)   Gga.6327.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013332
NCBI entrez gene - 421223     See in Manteia.
RefSeq - XM_015283361
RefSeq - NM_001199429
RefSeq - XM_015283359
RefSeq - XM_015283360
RefSeq - XM_015283357
RefSeq - XM_015283358
RefSeq Peptide - NP_001186358
swissprot - E1C5D4
Ensembl - ENSGALG00000008195
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nphp1ENSDARG00000009046Danio rerio
 NPHP1ENSG00000144061Homo sapiens
 Nphp1ENSMUSG00000027378Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR030642  Nephrocystin-1, SH3 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:1903348 positive regulation of bicellular tight junction assembly IEA
 cellular_componentGO:0005911 cell-cell junction IEA
 cellular_componentGO:0031514 motile cilium IEA


Pathways (from Reactome)
Pathway description
Anchoring of the basal body to the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000009959 Q68EF0* / Q96QF0* / RAB3IP* / AC025263.2* / RAB3A interacting protein*  / complex / reaction
 ENSGALG00000007615 Q5ZJN2 / RAB11A / Ras-related protein Rab-11A / P62491* / P62492* / RAB11A, member RAS oncogene family*  / complex / reaction






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr