ENSGALG00000008358


Gallus gallus

Features
Gene ID: ENSGALG00000008358
  
Biological name :AMBRA1
  
Synonyms : AMBRA1 / autophagy and beclin 1 regulator 1
  
Possible biological names infered from orthology : A2AH22 / Activating molecule in BECN1-regulated autophagy protein 1 / Q9C0C7
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 23508006
Gene end: 23633040
  
Corresponding Affymetrix probe sets: Gga.10059.1.S1_s_at (Chicken Array)   GgaAffx.20380.2.S1_s_at (Chicken Array)   GgaAffx.22549.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000037597
NCBI entrez gene - 423194     See in Manteia.
RefSeq - XM_004941601
RefSeq - XM_015287215
RefSeq - XM_015287216
RefSeq - XM_015287217
RefSeq - XM_001233288
swissprot - F1NX05
Ensembl - ENSGALG00000008358
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ambra1aENSDARG00000008322Danio rerio
 ambra1bENSDARG00000039878Danio rerio
 AMBRA1ENSG00000110497Homo sapiens
 A2AH22ENSMUSG00000040506Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IEA
 biological_processGO:0000422 autophagy of mitochondrion IEA
 biological_processGO:0000423 mitophagy IEA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0008285 negative regulation of cell proliferation IEA
 biological_processGO:0021915 neural tube development IEA
 biological_processGO:0043524 negative regulation of neuron apoptotic process IEA
 biological_processGO:0043552 positive regulation of phosphatidylinositol 3-kinase activity IEA
 biological_processGO:0098780 response to mitochondrial depolarisation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005930 axoneme IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IBA
 cellular_componentGO:0045335 phagocytic vesicle IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0051020 GTPase binding IEA


Pathways (from Reactome)
Pathway description
Macroautophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr