ENSGALG00000008806


Gallus gallus

Features
Gene ID: ENSGALG00000008806
  
Biological name :RPL12
  
Synonyms : ribosomal protein L12 / RPL12
  
Possible biological names infered from orthology : Gm16519 / P30050 / P35979
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 2051691
Gene end: 2054100
  
Corresponding Affymetrix probe sets: Gga.12923.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000014298
Ensembl peptide - ENSGALP00000061651
Ensembl peptide - ENSGALP00000061045
Ensembl peptide - ENSGALP00000058474
Ensembl peptide - ENSGALP00000058105
NCBI entrez gene - 417264     See in Manteia.
RefSeq - NM_001277679
RefSeq Peptide - NP_001264608
swissprot - E1BTG1
swissprot - A0A1L1RS63
swissprot - A0A1D5PZQ8
swissprot - A0A1D5PYQ0
Ensembl - ENSGALG00000008806
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl12ENSDARG00000006691Danio rerio
 RPL12ENSG00000197958Homo sapiens
 Gm16519ENSMUSG00000066983Mus musculus
 Rpl12ENSMUSG00000038900Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000911  Ribosomal protein L11/L12
 IPR020783  Ribosomal protein L11, C-terminal
 IPR020784  Ribosomal protein L11, N-terminal
 IPR020785  Ribosomal protein L11, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IBA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0019843 rRNA binding IBA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr