ENSMUSG00000038900


Mus musculus

Features
Gene ID: ENSMUSG00000038900
  
Biological name :Rpl12
  
Synonyms : P35979 / ribosomal protein L12 / Rpl12
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: B
Gene start: 32961559
Gene end: 32965345
  
Corresponding Affymetrix probe sets: 10353991 (MoGene1.0st)   10368504 (MoGene1.0st)   10373519 (MoGene1.0st)   10389162 (MoGene1.0st)   10415640 (MoGene1.0st)   10438583 (MoGene1.0st)   10471550 (MoGene1.0st)   10496032 (MoGene1.0st)   10606261 (MoGene1.0st)   1416026_a_at (Mouse Genome 430 2.0 Array)   1435655_at (Mouse Genome 430 2.0 Array)   1435725_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000141294
Ensembl peptide - ENSMUSP00000117461
NCBI entrez gene - 269261     See in Manteia.
MGI - MGI:98002
RefSeq - NM_009076
RefSeq Peptide - NP_033102
swissprot - A0A0A6YVW4
swissprot - P35979
swissprot - Q5BLK0
Ensembl - ENSMUSG00000038900
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl12ENSDARG00000006691Danio rerio
 RPL12ENSGALG00000008806Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm16519 / RPL12* / P30050* / ribosomal protein L12*ENSMUSG0000006698391


Protein motifs (from Interpro)
Interpro ID Name
 IPR000911  Ribosomal protein L11/L12
 IPR020783  Ribosomal protein L11, C-terminal
 IPR020784  Ribosomal protein L11, N-terminal
 IPR020785  Ribosomal protein L11, conserved site
 IPR036769  Ribosomal protein L11, C-terminal domain superfamily
 IPR036796  Ribosomal protein L11/L12, N-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IBA
 biological_processGO:0006412 translation IBA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 cellular_componentGO:0031012 extracellular matrix ISO
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome IBA
 molecular_functionGO:0019843 rRNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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