ENSGALG00000009119


Gallus gallus

Features
Gene ID: ENSGALG00000009119
  
Biological name :THUMPD2
  
Synonyms : THUMPD2 / THUMP domain containing 2
  
Possible biological names infered from orthology : Q9BTF0 / Q9CZB3 / THUMP domain-containing protein 2
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 16761868
Gene end: 16770284
  
Corresponding Affymetrix probe sets: GgaAffx.11257.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000014829
Ensembl peptide - ENSGALP00000058899
Ensembl peptide - ENSGALP00000044410
NCBI entrez gene - 421310     See in Manteia.
RefSeq - XM_004935288
RefSeq - XM_015283922
RefSeq - XM_419375
swissprot - E1BZ71
swissprot - A0A1L1RJH5
swissprot - A0A1D5NVN4
Ensembl - ENSGALG00000009119
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thumpd2ENSDARG00000093070Danio rerio
 Q9BTF0ENSG00000138050Homo sapiens
 Q9CZB3ENSMUSG00000024246Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P97770* / Q9BV44* / THUMPD3* / THUMP domain containing 3* / Mus musculus THUMP domain containing 3 (Thumpd3), transcript variant 2, mRNA.*ENSGALG0000000839416
P97770* / Q9BV44* / THUMPD3* / THUMP domain containing 3* / Mus musculus THUMP domain containing 3 (Thumpd3), transcript variant 2, mRNA.*ENSGALG000000448134


Protein motifs (from Interpro)
Interpro ID Name
 IPR000241  Putative RNA methylase domain
 IPR004114  THUMP domain
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030488 tRNA methylation IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0016423 tRNA (guanine) methyltransferase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr