ENSMUSG00000024246


Mus musculus

Features
Gene ID: ENSMUSG00000024246
  
Biological name :Thumpd2
  
Synonyms : Q9CZB3 / Thumpd2 / THUMP domain-containing protein 2
  
Possible biological names infered from orthology : Q9BTF0 / THUMP domain containing 2
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: E3
Gene start: 81026327
Gene end: 81065085
  
Corresponding Affymetrix probe sets: 10453216 (MoGene1.0st)   1428726_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000025093
NCBI entrez gene - 72167     See in Manteia.
MGI - MGI:1919417
RefSeq - XM_017317656
RefSeq - NM_028138
RefSeq - XM_011246637
RefSeq - XM_011246639
RefSeq - XM_011246636
RefSeq Peptide - NP_082414
swissprot - Q9CZB3
Ensembl - ENSMUSG00000024246
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thumpd2ENSDARG00000093070Danio rerio
 THUMPD2ENSGALG00000009119Gallus gallus
 Q9BTF0ENSG00000138050Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P97770 / Thumpd3 / Mus musculus THUMP domain containing 3 (Thumpd3), transcript variant 2, mRNA. / Q9BV44* / THUMP domain containing 3*ENSMUSG0000003026419


Protein motifs (from Interpro)
Interpro ID Name
 IPR000241  Putative RNA methylase domain
 IPR004114  THUMP domain
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030488 tRNA methylation IBA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016423 tRNA (guanine) methyltransferase activity IBA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr