ENSGALG00000008394


Gallus gallus

Features
Gene ID: ENSGALG00000008394
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : Mus musculus THUMP domain containing 3 (Thumpd3), transcript variant 2, mRNA. / P97770 / Q9BV44 / THUMPD3 / THUMP domain containing 3
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 19461508
Gene end: 19466342
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000013659
NCBI entrez gene - 416116     See in Manteia.
RefSeq - XM_004944719
RefSeq - XM_414446
swissprot - F1P5S9
Ensembl - ENSGALG00000008394
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thumpd3ENSDARG00000059634Danio rerio
 Q9BV44ENSG00000134077Homo sapiens
 P97770ENSMUSG00000030264Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
THUMPD2 / THUMP domain containing 2 / Q9BTF0* / Q9CZB3* / THUMP domain-containing protein 2 *ENSGALG0000000911922
P97770* / Q9BV44* / THUMPD3* / THUMP domain containing 3* / Mus musculus THUMP domain containing 3 (Thumpd3), transcript variant 2, mRNA.*ENSGALG000000448130


Protein motifs (from Interpro)
Interpro ID Name
 IPR000241  Putative RNA methylase domain
 IPR004114  THUMP domain
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030488 tRNA methylation IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0016423 tRNA (guanine) methyltransferase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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