ENSG00000134077


Homo sapiens

Features
Gene ID: ENSG00000134077
  
Biological name :THUMPD3
  
Synonyms : Q9BV44 / THUMPD3 / THUMP domain containing 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p25.3
Gene start: 9362842
Gene end: 9386791
  
Corresponding Affymetrix probe sets: 223804_s_at (Human Genome U133 Plus 2.0 Array)   225730_s_at (Human Genome U133 Plus 2.0 Array)   225741_at (Human Genome U133 Plus 2.0 Array)   242377_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000402968
Ensembl peptide - ENSP00000411126
Ensembl peptide - ENSP00000424064
Ensembl peptide - ENSP00000412199
Ensembl peptide - ENSP00000339532
Ensembl peptide - ENSP00000395893
Ensembl peptide - ENSP00000396359
NCBI entrez gene - 25917     See in Manteia.
RefSeq - XM_017006119
RefSeq - XM_011533570
RefSeq - XM_011533571
RefSeq - XM_017006113
RefSeq - XM_017006114
RefSeq - XM_017006115
RefSeq - XM_017006116
RefSeq - XM_017006117
RefSeq - XM_017006118
RefSeq - NM_001114092
RefSeq - NM_015453
RefSeq - XM_005265021
RefSeq - XM_005265022
RefSeq - XM_005265023
RefSeq - XM_005265024
RefSeq - XM_006713086
RefSeq Peptide - NP_001107564
RefSeq Peptide - NP_056268
swissprot - H7C0R6
swissprot - H7C3J3
swissprot - C9JP31
swissprot - A0A024R2F4
swissprot - Q9BV44
swissprot - C9J9V2
Ensembl - ENSG00000134077
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thumpd3ENSDARG00000059634Danio rerio
 ENSGALG00000008394Gallus gallus
 ENSGALG00000044813Gallus gallus
 P97770ENSMUSG00000030264Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9BTF0 / THUMPD2 / THUMP domain containing 2ENSG0000013805021


Protein motifs (from Interpro)
Interpro ID Name
 IPR000241  Putative RNA methylase domain
 IPR004114  THUMP domain
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030488 tRNA methylation IBA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016423 tRNA (guanine) methyltransferase activity IBA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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