ENSGALG00000009427


Gallus gallus

Features
Gene ID: ENSGALG00000009427
  
Biological name :TIA1
  
Synonyms : nucleolysin TIAR isoform 1 / TIA1
  
Possible biological names infered from orthology : P70318 / Q01085 / TIA1 cytotoxic granule associated RNA binding protein like 1 / TIAL1
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 30270619
Gene end: 30288911
  
Corresponding Affymetrix probe sets: Gga.8269.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015333
Ensembl peptide - ENSGALP00000063530
Ensembl peptide - ENSGALP00000056248
Ensembl peptide - ENSGALP00000049792
NCBI entrez gene - 771327     See in Manteia.
RefSeq - XM_015288710
RefSeq - NM_204356
RefSeq - XM_015288708
RefSeq - XM_015288709
RefSeq Peptide - NP_989687
swissprot - A0A1L1RXF5
swissprot - A0A1D5PTK0
swissprot - A0A1D5PAM9
swissprot - F1NY49
Ensembl - ENSGALG00000009427
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tial1ENSDARG00000009525Danio rerio
 TIAL1ENSG00000151923Homo sapiens
 Tial1ENSMUSG00000030846Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TIA1 / TIA1 cytotoxic granule associated RNA binding protein / P31483* / P52912* / cytotoxic granule-associated RNA binding protein 1*ENSGALG0000001387976


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR003954  RNA recognition motif domain, eukaryote
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007281 germ cell development IEA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0017145 stem cell division IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0010494 cytoplasmic stress granule IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0017091 AU-rich element binding IEA


Pathways (from Reactome)
Pathway description
FGFR2 alternative splicing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr