ENSGALG00000009452


Gallus gallus

Features
Gene ID: ENSGALG00000009452
  
Biological name :GALNT16
  
Synonyms : GALNT16 / polypeptide N-acetylgalactosaminyltransferase 16
  
Possible biological names infered from orthology : Q8N428 / Q9JJ61
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 28045229
Gene end: 28102157
  
Corresponding Affymetrix probe sets: Gga.17051.1.S1_at (Chicken Array)   Gga.17051.1.S1_x_at (Chicken Array)   Gga.2990.1.S1_at (Chicken Array)   GgaAffx.5957.1.S1_at (Chicken Array)   GgaAffx.5957.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015367
NCBI entrez gene - 423263     See in Manteia.
RefSeq - XM_001231964
RefSeq - XM_015287595
swissprot - F1NXH2
Ensembl - ENSGALG00000009452
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 galnt16ENSDARG00000053190Danio rerio
 Q8N428ENSG00000100626Homo sapiens
 Q9JJ61ENSMUSG00000021130Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GALNT14 / polypeptide N-acetylgalactosaminyltransferase 14 / Q8BVG5* / Q96FL9*ENSGALG0000000907856
GALNT2 / polypeptide N-acetylgalactosaminyltransferase 2 / Q6PB93* / Q10471* / Gm20388* / predicted gene 20388* / Polypeptide N-acetylgalactosaminyltransferase 2 Polypeptide N-acetylgalacto...ENSGALG0000001110652
GALNT11 / polypeptide N-acetylgalactosaminyltransferase 11 / Q8NCW6* / Q921L8*ENSGALG0000000623340
GALNT13 / polypeptide N-acetylgalactosaminyltransferase 13 / Q8CF93* / Q8IUC8*ENSGALG0000001253637
GALNT6 / polypeptide N-acetylgalactosaminyltransferase 6 / Q8C7U7* / Q8NCL4*ENSGALG0000004110137
GALNT1 / polypeptide N-acetylgalactosaminyltransferase 1 / O08912* / Q10472* / Polypeptide N-acetylgalactosaminyltransferase 1 Polypeptide N-acetylgalactosaminyltransferase 1 soluble form*ENSGALG0000001313536
GALNT3 / polypeptide N-acetylgalactosaminyltransferase 3 / P70419* / Q14435*ENSGALG0000001096036
GALNT12 / polypeptide N-acetylgalactosaminyltransferase 12 / Q8BGT9* / Q8IXK2*ENSGALG0000001319735
GALNT5* / Q7Z7M9* / Q8C102* / polypeptide N-acetylgalactosaminyltransferase 5*ENSGALG0000001254417


Protein motifs (from Interpro)
Interpro ID Name
 IPR000772  Ricin B, lectin domain
 IPR001173  Glycosyltransferase 2-like
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0018242 protein O-linked glycosylation via serine IEA
 biological_processGO:0018243 protein O-linked glycosylation via threonine IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004653 polypeptide N-acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr