ENSGALG00000013135


Gallus gallus

Features
Gene ID: ENSGALG00000013135
  
Biological name :GALNT1
  
Synonyms : GALNT1 / polypeptide N-acetylgalactosaminyltransferase 1
  
Possible biological names infered from orthology : O08912 / Polypeptide N-acetylgalactosaminyltransferase 1 Polypeptide N-acetylgalactosaminyltransferase 1 soluble form / Q10472
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 84076731
Gene end: 84150796
  
Corresponding Affymetrix probe sets: GgaAffx.8348.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021411
NCBI entrez gene - 420955     See in Manteia.
RefSeq - XM_015282326
RefSeq - NM_001006381
RefSeq - XM_015282327
RefSeq Peptide - NP_001006381
swissprot - Q5ZJL1
Ensembl - ENSGALG00000013135
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 galnt1ENSDARG00000061335Danio rerio
 GALNT1ENSG00000141429Homo sapiens
 Galnt1ENSMUSG00000000420Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GALNT13 / polypeptide N-acetylgalactosaminyltransferase 13 / Q8CF93* / Q8IUC8*ENSGALG0000001253681
GALNT3 / polypeptide N-acetylgalactosaminyltransferase 3 / P70419* / Q14435*ENSGALG0000001096044
GALNT6 / polypeptide N-acetylgalactosaminyltransferase 6 / Q8C7U7* / Q8NCL4*ENSGALG0000004110143
GALNT11 / polypeptide N-acetylgalactosaminyltransferase 11 / Q8NCW6* / Q921L8*ENSGALG0000000623342
GALNT12 / polypeptide N-acetylgalactosaminyltransferase 12 / Q8BGT9* / Q8IXK2*ENSGALG0000001319742
GALNT2 / polypeptide N-acetylgalactosaminyltransferase 2 / Q6PB93* / Q10471* / Gm20388* / predicted gene 20388* / Polypeptide N-acetylgalactosaminyltransferase 2 Polypeptide N-acetylgalacto...ENSGALG0000001110640
GALNT14 / polypeptide N-acetylgalactosaminyltransferase 14 / Q8BVG5* / Q96FL9*ENSGALG0000000907839
GALNT16 / polypeptide N-acetylgalactosaminyltransferase 16 / Q8N428* / Q9JJ61*ENSGALG0000000945237
GALNT5* / Q7Z7M9* / Q8C102* / polypeptide N-acetylgalactosaminyltransferase 5*ENSGALG0000001254418


Protein motifs (from Interpro)
Interpro ID Name
 IPR000772  Ricin B, lectin domain
 IPR001173  Glycosyltransferase 2-like
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006493 protein O-linked glycosylation IEA
 biological_processGO:0018242 protein O-linked glycosylation via serine IEA
 biological_processGO:0018243 protein O-linked glycosylation via threonine IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0004653 polypeptide N-acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0030145 manganese ion binding IEA
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
COPI-independent Golgi-to-ER retrograde traffic
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001547 P13127 / CAPZA1 / F-actin-capping protein subunit alpha-1 / P52907* / 4933400A11Rik* / RIKEN cDNA 4933400A11 gene* / capping actin protein of muscle Z-line alpha subunit 1*  / complex / reaction
 ENSGALG00000004034 CAPZB / P14315 / F-actin-capping protein subunit beta isoforms 1 and 2 / P47757* / P47756* / F-actin-capping protein subunit beta * / capping actin protein of muscle Z-line beta subunit*  / complex / reaction
 ENSGALG00000004534 DCTN4 / dynactin subunit 4 / Q8CBY8* / Q9UJW0* / Mus musculus dynactin 4 (Dctn4), transcript variant 2, mRNA.*  / complex / reaction
 ENSGALG00000008086 ACTR1A / ARP1 actin related protein 1 homolog A / P61163* / P61164* / Alpha-centractin *  / reaction / complex
 ENSGALG00000020999 DYNLL1 / dynein light chain LC8-type 1 / P63168* / P63167* / BC048507* / cDNA sequence BC048507* / Dynein light chain 1, cytoplasmic *  / complex / reaction
 ENSGALG00000005522 DYNLL2 / dynein light chain LC8-type 2 / Q96FJ2* / Q9D0M5* / Dynein light chain 2, cytoplasmic *  / complex / reaction
 ENSGALG00000006088 DCTN5 / dynactin subunit 5 / Q9BTE1* / Q9QZB9*  / complex / reaction
 ENSGALG00000005241 DYNC1LI2 / cytoplasmic dynein 1 light intermediate chain 2 / O43237* / Q6PDL0* / dynein cytoplasmic 1 light intermediate chain 2*  / complex / reaction
 ENSGALG00000005834 Q9PTR5 / PAFAH1B1 / Lissencephaly-1 homolog / P43034* / P63005* / platelet-activating factor acetylhydrolase, isoform 1b, subunit 1* / platelet activating factor acetylhydrolase 1b regulat...  / reaction
 ENSGALG00000011491 Q90828 / DYNC1LI1 / Cytoplasmic dynein 1 light intermediate chain 1 / Q8R1Q8* / Q9Y6G9* / dynein cytoplasmic 1 light intermediate chain 1*  / reaction / complex
 ENSGALG00000013125 CAPZA3 / capping actin protein of muscle Z-line alpha subunit 3 / P70190* / Q96KX2* / F-actin-capping protein subunit alpha-3 *  / complex / reaction
 ENSGALG00000017320 RAB6A / Q1KME6 / Ras-related protein Rab-6A / RAB6D* / RAB6C* / Q9H0N0* / P35279* / P20340* / RAB6A, member RAS oncogene family* / RAB6D, member RAS oncogene family* / RAB6C, member RAS on...  / reaction / complex
 ENSGALG00000021365 DCTN3 / dynactin subunit 3 / O75935* / Q9Z0Y1*  / complex / reaction
 ENSGALG00000010298 DCTN6 / dynactin subunit 6 / O00399* / Q9WUB4*  / reaction / complex
 ENSGALG00000043437 P28497 / CAPZA2 / F-actin-capping protein subunit alpha-2 / P47754* / P47755* / capping actin protein of muscle Z-line alpha subunit 2*  / complex / reaction
 ENSGALG00000011330 DYNC1H1 / dynein cytoplasmic 1 heavy chain 1 / Q14204* / Q9JHU4* / Cytoplasmic dynein 1 heavy chain 1 *  / complex / reaction






 

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