ENSGALG00000012536


Gallus gallus

Features
Gene ID: ENSGALG00000012536
  
Biological name :GALNT13
  
Synonyms : GALNT13 / polypeptide N-acetylgalactosaminyltransferase 13
  
Possible biological names infered from orthology : Q8CF93 / Q8IUC8
  
Species: Gallus gallus
  
Chr. number: 7
Strand: 1
Band:
Gene start: 35847351
Gene end: 35915121
  
Corresponding Affymetrix probe sets: Gga.11047.1.S1_at (Chicken Array)   GgaAffx.23938.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020448
Ensembl peptide - ENSGALP00000047060
NCBI entrez gene - 424319     See in Manteia.
RefSeq - XM_422165
RefSeq - XM_015290207
RefSeq - XM_015290208
RefSeq - XM_004943053
RefSeq - XM_004943054
RefSeq - XM_015290205
RefSeq - XM_015290206
swissprot - E1C6M1
swissprot - A0A1D5P308
Ensembl - ENSGALG00000012536
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 galnt13ENSDARG00000099227Danio rerio
 Q8IUC8ENSG00000144278Homo sapiens
 Q8CF93ENSMUSG00000060988Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GALNT1 / polypeptide N-acetylgalactosaminyltransferase 1 / O08912* / Q10472* / Polypeptide N-acetylgalactosaminyltransferase 1 Polypeptide N-acetylgalactosaminyltransferase 1 soluble form*ENSGALG0000001313580
GALNT3 / polypeptide N-acetylgalactosaminyltransferase 3 / P70419* / Q14435*ENSGALG0000001096044
GALNT6 / polypeptide N-acetylgalactosaminyltransferase 6 / Q8C7U7* / Q8NCL4*ENSGALG0000004110143
GALNT12 / polypeptide N-acetylgalactosaminyltransferase 12 / Q8BGT9* / Q8IXK2*ENSGALG0000001319742
GALNT11 / polypeptide N-acetylgalactosaminyltransferase 11 / Q8NCW6* / Q921L8*ENSGALG0000000623341
GALNT2 / polypeptide N-acetylgalactosaminyltransferase 2 / Q6PB93* / Q10471* / Gm20388* / predicted gene 20388* / Polypeptide N-acetylgalactosaminyltransferase 2 Polypeptide N-acetylgalacto...ENSGALG0000001110640
GALNT14 / polypeptide N-acetylgalactosaminyltransferase 14 / Q8BVG5* / Q96FL9*ENSGALG0000000907838
GALNT16 / polypeptide N-acetylgalactosaminyltransferase 16 / Q8N428* / Q9JJ61*ENSGALG0000000945237
GALNT5* / Q7Z7M9* / Q8C102* / polypeptide N-acetylgalactosaminyltransferase 5*ENSGALG0000001254418


Protein motifs (from Interpro)
Interpro ID Name
 IPR000772  Ricin B, lectin domain
 IPR001173  Glycosyltransferase 2-like
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006493 protein O-linked glycosylation IEA
 biological_processGO:0018242 protein O-linked glycosylation via serine IEA
 biological_processGO:0018243 protein O-linked glycosylation via threonine IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004653 polypeptide N-acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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