ENSGALG00000009520


Gallus gallus

Features
Gene ID: ENSGALG00000009520
  
Biological name :MARCH1
  
Synonyms : MARCH1 / membrane associated ring-CH-type finger 1
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase MARCH1 / Q6NZQ8 / Q8TCQ1
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 23589759
Gene end: 23789476
  
Corresponding Affymetrix probe sets: GgaAffx.5990.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057846
Ensembl peptide - ENSGALP00000031642
Ensembl peptide - ENSGALP00000055565
NCBI entrez gene - 422420     See in Manteia.
RefSeq - XM_015285297
RefSeq - XM_015285294
RefSeq - XM_015285295
RefSeq - XM_015285296
RefSeq - NM_001286224
RefSeq - XM_015285291
RefSeq - XM_015285292
RefSeq - XM_015285293
RefSeq Peptide - NP_001273153
swissprot - F1NSN9
swissprot - A0A1D5PXZ7
Ensembl - ENSGALG00000009520
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BX470214.1ENSDARG00000110724Danio rerio
 march1ENSDARG00000037487Danio rerio
 MARCH1ENSG00000145416Homo sapiens
 March1ENSMUSG00000036469Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MARCH8 / membrane associated ring-CH-type finger 8 / Q5T0T0* / Q9DBD2* / E3 ubiquitin-protein ligase MARCH8 *ENSGALG0000000586768
MARCH2 / membrane associated ring-CH-type finger 2 / Q99M02* / Q9P0N8* / E3 ubiquitin-protein ligase MARCH2 *ENSGALG0000000059922
MARCH3 / membrane associated ring-CH-type finger 3 / Q86UD3* / Q8BRX9* / E3 ubiquitin-protein ligase MARCH3 *ENSGALG0000002867321
MARCH11 / membrane associated ring-CH-type finger 11 / A6NNE9* / Q8CBH7* / E3 ubiquitin-protein ligase MARCH11 *ENSGALG0000004258417
MARCH4 / membrane associated ring-CH-type finger 4 / Q80TE3* / Q9P2E8* / E3 ubiquitin-protein ligase MARCH4 *ENSGALG0000002967517


Protein motifs (from Interpro)
Interpro ID Name
 IPR011016  Zinc finger, RING-CH-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR033275  E3 ubiquitin-protein ligase MARCH-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IEA
 biological_processGO:0002495 antigen processing and presentation of peptide antigen via MHC class II IEA
 biological_processGO:0006955 immune response IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031901 early endosome membrane IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 cellular_componentGO:0032588 trans-Golgi network membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0042287 MHC protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr