ENSGALG00000009538


Gallus gallus

Features
Gene ID: ENSGALG00000009538
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : Q8BYK4 / Q8TC12 / Q96NR8 / Q9QYF1 / RDH11 / RDH12 / Retinol dehydrogenase 11 / retinol dehydrogenase 11 (all-trans/9-cis/11-cis) / Retinol dehydrogenase 12 / retinol dehydrogenase 12 (all-trans/9-cis/11-cis)
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 28902887
Gene end: 28910025
  
Corresponding Affymetrix probe sets: Gga.2472.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015508
NCBI entrez gene - 423274     See in Manteia.
RefSeq - XM_421193
swissprot - E1BTL3
Ensembl - ENSGALG00000009538
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rdh12ENSDARG00000018069Danio rerio
 RDH11ENSG00000072042Homo sapiens
 RDH12ENSG00000139988Homo sapiens
 Rdh11ENSMUSG00000066441Mus musculus
 Rdh12ENSMUSG00000021123Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RDH14 / retinol dehydrogenase 14 / Q9ERI6* / Q9HBH5*ENSGALG0000001987350
DHRS13 / dehydrogenase/reductase 13 / Q5SS80* / Q6UX07* / Dehydrogenase/reductase SDR family member 13 *ENSGALG0000000400943
DHRSX / dehydrogenase/reductase X-linked / Q8N5I4*ENSGALG0000001668137
WWOX / WW domain-containing oxidoreductase / Q91WL8* / Q9NZC7*ENSGALG0000000537731
A0PJE2* / DHRS12* / dehydrogenase/reductase 12*ENSGALG000000403216


Protein motifs (from Interpro)
Interpro ID Name
 IPR002347  Short-chain dehydrogenase/reductase SDR
 IPR016040  NAD(P)-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0016491 oxidoreductase activity IBA


Pathways (from Reactome)
Pathway description
The canonical retinoid cycle in rods (twilight vision)
RA biosynthesis pathway
Retinoid metabolism and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000005327 RBP2 / retinol binding protein 2 / P50120* / Q08652* / retinol binding protein 2, cellular*  / reaction
 ENSGALG00000006676 RLBP1 / retinaldehyde binding protein 1 / P12271* / Q9Z275*  / reaction






 

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