ENSGALG00000009858


Gallus gallus

Features
Gene ID: ENSGALG00000009858
  
Biological name :SLC30A1
  
Synonyms : SLC30A1 / solute carrier family 30 member 1
  
Possible biological names infered from orthology : Q60738 / Q9Y6M5 / solute carrier family 30 (zinc transporter), member 1
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 22218950
Gene end: 22224149
  
Corresponding Affymetrix probe sets: Gga.10012.1.S1_s_at (Chicken Array)   GgaAffx.20459.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016015
swissprot - F1NHZ7
Ensembl - ENSGALG00000009858
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc30a1aENSDARG00000005463Danio rerio
 slc30a1bENSDARG00000053896Danio rerio
 Q9Y6M5ENSG00000170385Homo sapiens
 Q60738ENSMUSG00000037434Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SLC30A10 / solute carrier family 30 member 10 / Q3UVU3* / Q6XR72* / Zinc transporter 10 *ENSGALG0000002672728
SLC30A2 / solute carrier family 30 member 2 / Q2HJ10* / Q9BRI3* / solute carrier family 30 (zinc transporter), member 2*ENSGALG0000001037518
SLC30A4 / zinc transporter 4 / O14863* / O35149* / solute carrier family 30 member 4*ENSGALG0000000570316
SLC30A8 / solute carrier family 30 member 8 / Q8BGG0* / Q8IWU4* / Zinc transporter 8 *ENSGALG0000003437715


Protein motifs (from Interpro)
Interpro ID Name
 IPR002524  Cation efflux protein
 IPR027469  Cation efflux transmembrane domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0006812 cation transport IEA
 biological_processGO:0006829 zinc ion transport IEA
 biological_processGO:0006874 cellular calcium ion homeostasis IEA
 biological_processGO:0006882 cellular zinc ion homeostasis IEA
 biological_processGO:0010043 response to zinc ion IBA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0061088 regulation of sequestering of zinc ion IBA
 biological_processGO:0065009 regulation of molecular function IEA
 biological_processGO:0071577 zinc ion transmembrane transport IEA
 biological_processGO:0071584 negative regulation of zinc ion transmembrane import IEA
 biological_processGO:0090281 negative regulation of calcium ion import IEA
 biological_processGO:0098655 cation transmembrane transport IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 molecular_functionGO:0005385 zinc ion transmembrane transporter activity IBA
 molecular_functionGO:0008324 cation transmembrane transporter activity IEA
 molecular_functionGO:0019855 calcium channel inhibitor activity IEA


Pathways (from Reactome)
Pathway description
Zinc efflux and compartmentalization by the SLC30 family


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr