ENSGALG00000009871


Gallus gallus

Features
Gene ID: ENSGALG00000009871
  
Biological name :RCOR3
  
Synonyms : RCOR3 / REST corepressor 3
  
Possible biological names infered from orthology : Q6PGA0 / Q9P2K3
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 22318822
Gene end: 22342595
  
Corresponding Affymetrix probe sets: Gga.16053.1.S1_at (Chicken Array)   GgaAffx.12697.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016032
NCBI entrez gene - 421380     See in Manteia.
RefSeq - XM_015283678
RefSeq - NM_001079727
RefSeq - XM_015283676
RefSeq - XM_015283677
RefSeq - XM_015283668
RefSeq - XM_015283669
RefSeq - XM_015283670
RefSeq - XM_015283671
RefSeq - XM_015283672
RefSeq - XM_015283673
RefSeq - XM_015283674
RefSeq - XM_015283675
RefSeq Peptide - NP_001073195
swissprot - F1NHX4
Ensembl - ENSGALG00000009871
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rcor3ENSDARG00000004502Danio rerio
 RCOR3ENSG00000117625Homo sapiens
 Rcor3ENSMUSG00000037395Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RCOR1 / REST corepressor 1 / Q8CFE3* / Q9UKL0*ENSGALG0000001138453
NCOR1 / nuclear receptor corepressor 1 / O75376* / nuclear receptor co-repressor 1*ENSGALG0000000447724
NCOR2 / nuclear receptor corepressor 2 / Q9WU42* / Q9Y618*ENSGALG0000000312021


Protein motifs (from Interpro)
Interpro ID Name
 IPR000949  ELM2 domain
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR017884  SANT domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005667 transcription factor complex IBA
 cellular_componentGO:0017053 transcriptional repressor complex IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0003714 transcription corepressor activity IBA
 molecular_functionGO:0008134 transcription factor binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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