ENSG00000117625


Homo sapiens

Features
Gene ID: ENSG00000117625
  
Biological name :RCOR3
  
Synonyms : Q9P2K3 / RCOR3 / REST corepressor 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q32.2
Gene start: 211258377
Gene end: 211316385
  
Corresponding Affymetrix probe sets: 218344_s_at (Human Genome U133 Plus 2.0 Array)   222605_at (Human Genome U133 Plus 2.0 Array)   241433_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000434181
Ensembl peptide - ENSP00000434605
Ensembl peptide - ENSP00000437048
Ensembl peptide - ENSP00000436838
Ensembl peptide - ENSP00000436057
Ensembl peptide - ENSP00000355972
Ensembl peptide - ENSP00000355973
Ensembl peptide - ENSP00000398558
Ensembl peptide - ENSP00000413929
Ensembl peptide - ENSP00000432779
Ensembl peptide - ENSP00000433441
NCBI entrez gene - 55758     See in Manteia.
RefSeq - XM_017001767
RefSeq - XM_006711442
RefSeq - XM_011509748
RefSeq - XM_011509749
RefSeq - XM_017001758
RefSeq - XM_017001759
RefSeq - XM_017001760
RefSeq - XM_017001761
RefSeq - XM_017001762
RefSeq - XM_017001763
RefSeq - XM_017001764
RefSeq - XM_017001765
RefSeq - XM_017001766
RefSeq - NM_001136223
RefSeq - NM_001136224
RefSeq - NM_001136225
RefSeq - NM_018254
RefSeq - XM_005273191
RefSeq Peptide - NP_001129696
RefSeq Peptide - NP_001129697
RefSeq Peptide - NP_060724
RefSeq Peptide - NP_001129695
swissprot - H0YDR8
swissprot - H0YF22
swissprot - B4DV59
swissprot - E9PR63
swissprot - Q9P2K3
swissprot - E9PQE5
swissprot - E9PPC5
swissprot - H0YDD7
Ensembl - ENSG00000117625
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rcor3ENSDARG00000004502Danio rerio
 RCOR3ENSGALG00000009871Gallus gallus
 Rcor3ENSMUSG00000037395Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RCOR2 / Q8IZ40 / REST corepressor 2ENSG0000016777155
RCOR1 / Q9UKL0 / REST corepressor 1ENSG0000008990249
NCOR1 / O75376 / nuclear receptor corepressor 1ENSG0000014102725
NCOR2 / Q9Y618 / nuclear receptor corepressor 2ENSG0000019649824


Protein motifs (from Interpro)
Interpro ID Name
 IPR000949  ELM2 domain
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR017884  SANT domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IBA
 cellular_componentGO:0017053 transcriptional repressor complex IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0003714 transcription corepressor activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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