ENSGALG00000010124


Gallus gallus

Features
Gene ID: ENSGALG00000010124
  
Biological name :RPS8
  
Synonyms : ribosomal protein S8 / RPS8
  
Possible biological names infered from orthology : P62241 / P62242
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 20837594
Gene end: 20842106
  
Corresponding Affymetrix probe sets: Gga.4803.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016447
Ensembl peptide - ENSGALP00000063863
Ensembl peptide - ENSGALP00000061999
Ensembl peptide - ENSGALP00000056100
NCBI entrez gene - 424584     See in Manteia.
RefSeq - NM_001252126
RefSeq Peptide - NP_001239055
swissprot - A0A1L1RYE0
swissprot - A0A1L1RT57
swissprot - A0A1D5PT58
swissprot - F1NB02
Ensembl - ENSGALG00000010124
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rps8bENSDARG00000057368Danio rerio
 RPS8ENSG00000142937Homo sapiens
 Rps8ENSMUSG00000047675Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001047  Ribosomal protein S8e
 IPR018283  Ribosomal protein S8e, conserved site
 IPR022309  Ribosomal protein S8e/ribosomal biogenesis NSA2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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