ENSGALG00000010229


Gallus gallus

Features
Gene ID: ENSGALG00000010229
  
Biological name :ABCD4
  
Synonyms : ABCD4 / ATP binding cassette subfamily D member 4
  
Possible biological names infered from orthology : ATP-binding cassette, sub-family D (ALD), member 4 / O14678 / O89016
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 37898509
Gene end: 37911272
  
Corresponding Affymetrix probe sets: GgaAffx.6443.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016610
Ensembl peptide - ENSGALP00000053986
Ensembl peptide - ENSGALP00000050479
Ensembl peptide - ENSGALP00000048175
NCBI entrez gene - 423349     See in Manteia.
RefSeq - XM_015287673
swissprot - A0A1D5PMB1
swissprot - A0A1D5PCJ0
swissprot - A0A1D5P651
swissprot - F1N9P5
Ensembl - ENSGALG00000010229
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 abcd4ENSDARG00000061770Danio rerio
 ABCD4ENSG00000119688Homo sapiens
 Abcd4ENSMUSG00000021240Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABCD3 / ATP binding cassette subfamily D member 3 / P28288* / P55096* / ATP-binding cassette, sub-family D (ALD), member 3*ENSGALG0000000564727
ABCD2 / ATP binding cassette subfamily D member 2 / Q9UBJ2* / ATP-binding cassette, sub-family D (ALD), member 2*ENSGALG0000004255427


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009235 cobalamin metabolic process IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
Cobalamin (Cbl, vitamin B12) transport and metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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