ENSGALG00000010341


Gallus gallus

Features
Gene ID: ENSGALG00000010341
  
Biological name :XPO5
  
Synonyms : exportin 5 / XPO5
  
Possible biological names infered from orthology : Q924C1 / Q9HAV4
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 30965058
Gene end: 30992748
  
Corresponding Affymetrix probe sets: Gga.10322.1.S1_s_at (Chicken Array)   Gga.11222.1.S1_at (Chicken Array)   Gga.14734.1.S1_at (Chicken Array)   Gga.14883.1.S1_at (Chicken Array)   Gga.16432.1.S1_at (Chicken Array)   GgaAffx.23205.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055906
Ensembl peptide - ENSGALP00000016816
NCBI entrez gene - 421450     See in Manteia.
RefSeq - XM_015283715
RefSeq - NM_001277652
RefSeq - XM_015283713
RefSeq - XM_015283714
RefSeq Peptide - NP_001264581
swissprot - F1NBL6
swissprot - A0A1D5PSL9
Ensembl - ENSGALG00000010341
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01087629.1ENSDARG00000112522Danio rerio
 XPO5ENSDARG00000098868Danio rerio
 XPO5ENSG00000124571Homo sapiens
 Xpo5ENSMUSG00000067150Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001494  Importin-beta, N-terminal domain
 IPR011989  Armadillo-like helical
 IPR013598  Exportin-1/Importin-beta-like
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006405 RNA export from nucleus IBA
 biological_processGO:0006611 protein export from nucleus IEA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0035281 pre-miRNA export from nucleus IEA
 biological_processGO:0046825 regulation of protein export from nucleus IBA
 biological_processGO:1900370 positive regulation of RNA interference IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0035068 micro-ribonucleoprotein complex IEA
 cellular_componentGO:0042272 nuclear RNA export factor complex IEA
 cellular_componentGO:0042565 RNA nuclear export complex IBA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0005049 nuclear export signal receptor activity IBA
 molecular_functionGO:0008536 Ran GTPase binding IEA
 molecular_functionGO:0008565 protein transporter activity IEA
 molecular_functionGO:0070883 pre-miRNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000002569 RAN / P42558 / GTP-binding nuclear protein Ran / P62826* / P62827* / Q61820* / Rasl2-9* / 1700009N14Rik* / RIKEN cDNA 1700009N14 gene* / RAS-like, family 2, locus 9* / RAN, member RAS onco...  / complex






 

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