ENSGALG00000010513


Gallus gallus

Features
Gene ID: ENSGALG00000010513
  
Biological name :OPNVA
  
Synonyms : OPNVA / vertebrate ancient opsin isoform 2
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 35336653
Gene end: 35342219
  
Corresponding Affymetrix probe sets: GgaAffx.6650.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017099
Ensembl peptide - ENSGALP00000041882
NCBI entrez gene - 423974     See in Manteia.
RefSeq - XM_015288992
RefSeq - NM_001105318
RefSeq - NM_001310089
RefSeq - NM_001310090
RefSeq - XM_015288991
RefSeq Peptide - NP_001098788
RefSeq Peptide - NP_001297018
RefSeq Peptide - NP_001297019
swissprot - D0E2W5
swissprot - A7M6L0
Ensembl - ENSGALG00000010513
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 valopaENSDARG00000021150Danio rerio
 valopbENSDARG00000054181Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
OPNP / OPN1LW* / OPN1MW* / P0DN78* / O35599* / P04000* / P04001* / P0DN77* / OPN1MW3* / OPN1MW2* / opsin 1, long wave sensitive* / Medium-wave-sensitive opsin 1 * / opsin 1, medium wave sen...ENSGALG0000000492440
P28683 / OPN1MSW / Green-sensitive opsin ENSGALG0000000284839
RHO / rhodopsin / P08100* / P15409*ENSGALG0000002074535
Gallus gallus pinopsin-like (LOC771085), mRNA.ENSGALG0000001680231
OPN3 / opsin 3 / Q9H1Y3* / Q9WUK7*ENSGALG0000001076230
OPN5L1ENSGALG0000001515327
RRH / visual pigment-like receptor peropsin / O14718* / O35214* / retinal pigment epithelium-derived rhodopsin homolog*ENSGALG0000001218125
OPN4 / melanopsin / Q9QXZ9* / Q9UHM6* / opsin 4*ENSGALG0000000193425
OPN4-1 / photopigment melanopsin-like ENSGALG0000004166225
ENSGALG0000002762424
OPN5 / opsin-5 / Q6U736* / Q6VZZ7*ENSGALG0000001672522
OPN5L2ENSGALG0000001669920


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR001760  Opsin
 IPR017452  GPCR, rhodopsin-like, 7TM
 IPR027430  Visual pigments (opsins) retinal binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0007602 phototransduction IEA
 biological_processGO:0007603 phototransduction, visible light IMP
 biological_processGO:0016038 absorption of visible light IMP
 biological_processGO:0018298 protein-chromophore linkage IMP
 biological_processGO:0050896 response to stimulus IEA
 biological_processGO:0071482 cellular response to light stimulus IMP
 cellular_componentGO:0001750 photoreceptor outer segment IBA
 cellular_componentGO:0016020 membrane IMP
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030424 axon IMP
 cellular_componentGO:0030425 dendrite IMP
 cellular_componentGO:0043204 perikaryon IMP
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0008020 G-protein coupled photoreceptor activity IMP
 molecular_functionGO:0009881 photoreceptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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