ENSGALG00000041662


Gallus gallus

Features
Gene ID: ENSGALG00000041662
  
Biological name :OPN4-1
  
Synonyms : OPN4-1 / photopigment melanopsin-like
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 37518222
Gene end: 37532248
  
Corresponding Affymetrix probe sets: Gga.970.1.S1_at (Chicken Array)   Gga.970.1.S2_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045709
Ensembl peptide - ENSGALP00000063671
NCBI entrez gene - 395334     See in Manteia.
RefSeq - XM_015276120
RefSeq - XM_015276117
RefSeq - XM_015276118
RefSeq - XM_015276119
RefSeq - NM_204625
RefSeq - XM_015276114
RefSeq - XM_015276115
RefSeq - XM_015276116
RefSeq Peptide - NP_989956
swissprot - A0A1L1RXW3
swissprot - A0A1D5NZ94
Ensembl - ENSGALG00000041662
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 opn4xaENSDARG00000079129Danio rerio
 opn4xbENSDARG00000103259Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
OPN4 / melanopsin / Q9QXZ9* / Q9UHM6* / opsin 4*ENSGALG0000000193438
OPN5L1ENSGALG0000001515319
OPN3 / opsin 3 / Q9H1Y3* / Q9WUK7*ENSGALG0000001076218
RHO / rhodopsin / P08100* / P15409*ENSGALG0000002074517
OPN5 / opsin-5 / Q6U736* / Q6VZZ7*ENSGALG0000001672517
OPNVA / vertebrate ancient opsin isoform 2 ENSGALG0000001051317
P28683 / OPN1MSW / Green-sensitive opsin ENSGALG0000000284817
OPN5L2ENSGALG0000001669917
OPNP / OPN1LW* / OPN1MW* / P0DN78* / O35599* / P04000* / P04001* / P0DN77* / OPN1MW3* / OPN1MW2* / opsin 1, long wave sensitive* / Medium-wave-sensitive opsin 1 * / opsin 1, medium wave sen...ENSGALG0000000492416
Gallus gallus pinopsin-like (LOC771085), mRNA.ENSGALG0000001680216
RRH / visual pigment-like receptor peropsin / O14718* / O35214* / retinal pigment epithelium-derived rhodopsin homolog*ENSGALG0000001218115
ENSGALG0000002762413


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR001760  Opsin
 IPR017452  GPCR, rhodopsin-like, 7TM
 IPR027430  Visual pigments (opsins) retinal binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0007602 phototransduction IEA
 biological_processGO:0018298 protein-chromophore linkage IEA
 biological_processGO:0050896 response to stimulus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0009881 photoreceptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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