ENSGALG00000010869


Gallus gallus

Features
Gene ID: ENSGALG00000010869
  
Biological name :MYSM1
  
Synonyms : histone H2A deubiquitinase MYSM1 / MYSM1
  
Possible biological names infered from orthology : Myb like, SWIRM and MPN domains 1 / Q5VVJ2 / Q69Z66
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 26417387
Gene end: 26429418
  
Corresponding Affymetrix probe sets: Gga.19362.1.S1_at (Chicken Array)   Gga.4343.1.S1_s_at (Chicken Array)   Gga.6922.1.S1_at (Chicken Array)   GgaAffx.23356.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000037248
NCBI entrez gene - 424671     See in Manteia.
RefSeq - NM_001012927
RefSeq - XM_015291022
RefSeq - XM_015291023
RefSeq Peptide - NP_001012945
swissprot - F1NCM9
Ensembl - ENSGALG00000010869
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mysm1ENSDARG00000034693Danio rerio
 MYSM1ENSG00000162601Homo sapiens
 Mysm1ENSMUSG00000062627Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MPND / MPN domain containing / Q3TV65* / Q8N594* / MPN domain-containing protein *ENSGALG0000003408710


Protein motifs (from Interpro)
Interpro ID Name
 IPR000555  JAB1/MPN/MOV34 metalloenzyme domain
 IPR001005  SANT/Myb domain
 IPR007526  SWIRM domain
 IPR009057  Homeobox-like domain superfamily
 IPR011991  ArsR-like helix-turn-helix domain
 IPR017884  SANT domain
 IPR033497  Histone H2A deubiquitinase MYSM1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006338 chromatin remodeling IEA
 biological_processGO:0030334 regulation of cell migration IEA
 biological_processGO:0035522 monoubiquitinated histone H2A deubiquitination IEA
 biological_processGO:0043473 pigmentation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0051797 regulation of hair follicle development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA
 molecular_functionGO:0042393 histone binding IEA
 molecular_functionGO:0044877 protein-containing complex binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr