ENSGALG00000011541


Gallus gallus

Features
Gene ID: ENSGALG00000011541
  
Biological name :BIN1
  
Synonyms : BIN1 / bridging integrator 1
  
Possible biological names infered from orthology : Myc box-dependent-interacting protein 1 / O00499 / O08539
  
Species: Gallus gallus
  
Chr. number: 7
Strand: 1
Band:
Gene start: 23809924
Gene end: 23893673
  
Corresponding Affymetrix probe sets: Gga.2168.1.S1_at (Chicken Array)   Gga.8644.1.S1_at (Chicken Array)   GgaAffx.11745.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018797
NCBI entrez gene - 424228     See in Manteia.
RefSeq - XM_015289819
RefSeq - NM_001006524
RefSeq - XM_015289817
RefSeq - XM_015289818
RefSeq - XM_015289802
RefSeq - XM_015289803
RefSeq - XM_015289804
RefSeq - XM_015289805
RefSeq - XM_015289806
RefSeq - XM_015289807
RefSeq - XM_015289808
RefSeq - XM_015289809
RefSeq - XM_015289810
RefSeq - XM_015289811
RefSeq - XM_015289812
RefSeq - XM_015289813
RefSeq - XM_015289814
RefSeq - XM_015289815
RefSeq - XM_015289816
RefSeq Peptide - NP_001006524
swissprot - F1NZ04
Ensembl - ENSGALG00000011541
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bin1aENSDARG00000042114Danio rerio
 bin1bENSDARG00000058820Danio rerio
 BIN1ENSG00000136717Homo sapiens
 Bin1ENSMUSG00000024381Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AMPH / amphiphysin / P49418* / Q7TQF7*ENSGALG0000003295854
BIN2 / bridging integrator 2 ENSGALG0000003792938
BIN2* / bridging integrator 2*ENSGALG0000003919831


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR003005  Amphiphysin
 IPR003023  Amphiphysin 2
 IPR004148  BAR domain
 IPR027267  AH/BAR domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006997 nucleus organization IEA
 biological_processGO:0008333 endosome to lysosome transport IEA
 biological_processGO:0030100 regulation of endocytosis IEA
 biological_processGO:0042692 muscle cell differentiation IEA
 biological_processGO:0043065 positive regulation of apoptotic process IEA
 biological_processGO:0045664 regulation of neuron differentiation IEA
 biological_processGO:0048711 positive regulation of astrocyte differentiation IEA
 biological_processGO:0051647 nucleus localization IEA
 biological_processGO:0060988 lipid tube assembly IEA
 biological_processGO:0071156 regulation of cell cycle arrest IEA
 biological_processGO:1902430 negative regulation of amyloid-beta formation IEA
 biological_processGO:1902960 negative regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0060987 lipid tube IEA
 molecular_functionGO:0002020 protease binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0048156 tau protein binding IEA
 molecular_functionGO:0051015 actin filament binding IEA
 molecular_functionGO:0051087 chaperone binding IEA
 molecular_functionGO:0070063 RNA polymerase binding IEA


Pathways (from Reactome)
Pathway description
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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