ENSGALG00000012720


Gallus gallus

Features
Gene ID: ENSGALG00000012720
  
Biological name :NUP153
  
Synonyms : nucleoporin 153 / NUP153
  
Possible biological names infered from orthology : P49790
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 62240247
Gene end: 62268129
  
Corresponding Affymetrix probe sets: Gga.11470.1.S1_at (Chicken Array)   Gga.15935.1.S1_s_at (Chicken Array)   GgaAffx.23985.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057748
NCBI entrez gene - 420848     See in Manteia.
RefSeq - XM_015275969
RefSeq - XM_015275970
RefSeq - XM_015275971
swissprot - A0A1D5PXQ1
Ensembl - ENSGALG00000012720
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nup153ENSDARG00000099972Danio rerio
 NUP153ENSG00000124789Homo sapiens
 Nup153ENSMUSG00000021374Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001876  Zinc finger, RanBP2-type
 IPR013913  Nucleoporin Nup153, N-terminal
 IPR018892  Retro-transposon transporting motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006913 nucleocytoplasmic transport IEA
 biological_processGO:0046832 negative regulation of RNA export from nucleus IEA
 biological_processGO:0051292 nuclear pore complex assembly IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005643 nuclear pore IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0034399 nuclear periphery IEA
 cellular_componentGO:0042405 nuclear inclusion body IEA
 cellular_componentGO:0044615 nuclear pore nuclear basket IEA
 molecular_functionGO:0017056 structural constituent of nuclear pore IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0043495 protein membrane anchor IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
snRNP Assembly
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
SUMOylation of SUMOylation proteins
SUMOylation of chromatin organization proteins
SUMOylation of DNA replication proteins
Transcriptional regulation by small RNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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