ENSGALG00000012921


Gallus gallus

Features
Gene ID: ENSGALG00000012921
  
Biological name :ETV6
  
Synonyms : ETS variant 6 / ETV6
  
Possible biological names infered from orthology : P41212 / P97360 / Transcription factor ETV6
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 71540993
Gene end: 71673765
  
Corresponding Affymetrix probe sets: Gga.13444.1.S1_at (Chicken Array)   Gga.3476.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000036503
NCBI entrez gene - 395750     See in Manteia.
RefSeq - NM_001199273
RefSeq - XM_015290010
RefSeq Peptide - NP_001186202
swissprot - F1NRC2
Ensembl - ENSGALG00000012921
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ETV6ENSG00000139083Homo sapiens
 Etv6ENSMUSG00000030199Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ETV7 / ETS variant 7 / Q9Y603*ENSGALG0000000050434
ENSGALG0000000279215
ELF1 / ETS-related transcription factor Elf-1 / P32519* / Q60775* / E74 like ETS transcription factor 1*ENSGALG0000001694714
ELF2 / E74 like ETS transcription factor 2 / Q15723* / Q9JHC9* / ETS-related transcription factor Elf-2 *ENSGALG0000000977414
EHF / ETS homologous factor / O70273* / Q9NZC4*ENSGALG0000000781714
ELF3 / E74 like ETS transcription factor 3 / P78545* / Q3UPW2* / ETS-related transcription factor Elf-3 *ENSGALG0000000061614
ELF5 / E74 like ETS transcription factor 5 / Q8VDK3* / Q9UKW6* / ETS-related transcription factor Elf-5 *ENSGALG0000003586713


Protein motifs (from Interpro)
Interpro ID Name
 IPR000418  Ets domain
 IPR003118  Pointed domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR013761  Sterile alpha motif/pointed domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0007296 vitellogenesis IEA
 biological_processGO:0022008 neurogenesis IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0071425 hematopoietic stem cell proliferation IEA
 biological_processGO:0097152 mesenchymal cell apoptotic process IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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