ENSMUSG00000030199


Mus musculus

Features
Gene ID: ENSMUSG00000030199
  
Biological name :Etv6
  
Synonyms : Etv6 / P97360 / Transcription factor ETV6
  
Possible biological names infered from orthology : ETS variant 6 / P41212
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: G1
Gene start: 134035700
Gene end: 134270158
  
Corresponding Affymetrix probe sets: 10542275 (MoGene1.0st)   1423401_at (Mouse Genome 430 2.0 Array)   1434880_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000130761
Ensembl peptide - ENSMUSP00000079818
Ensembl peptide - ENSMUSP00000107594
NCBI entrez gene - 14011     See in Manteia.
MGI - MGI:109336
RefSeq - XM_011241208
RefSeq - NM_001303102
RefSeq - NM_007961
RefSeq - XM_011241206
RefSeq - XM_011241207
RefSeq Peptide - NP_031987
RefSeq Peptide - NP_001290031
swissprot - E9QAJ7
swissprot - P97360
swissprot - E9Q8J8
Ensembl - ENSMUSG00000030199
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ETV6ENSGALG00000012921Gallus gallus
 ETV6ENSG00000139083Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Spdef / Q9WTP3 / SAM pointed domain-containing Ets transcription factor / O95238*ENSMUSG0000002421515
Elf3 / Q3UPW2 / ETS-related transcription factor Elf-3 / P78545* / E74 like ETS transcription factor 3*ENSMUSG0000000305114
Elf4 / Q9Z2U4 / ETS-related transcription factor Elf-4 / Q99607* / E74 like ETS transcription factor 4*ENSMUSG0000003110314
Elf2 / Q9JHC9 / ETS-related transcription factor Elf-2 / Q15723* / E74 like ETS transcription factor 2*ENSMUSG0000003717414
Elf1 / Q60775 / ETS-related transcription factor Elf-1 / P32519* / E74 like ETS transcription factor 1*ENSMUSG0000003646113
Ehf / O70273 / ETS homologous factor / Q9NZC4*ENSMUSG0000001235013
Elf5 / Q8VDK3 / ETS-related transcription factor Elf-5 / Q9UKW6* / E74 like ETS transcription factor 5*ENSMUSG0000002718612


Protein motifs (from Interpro)
Interpro ID Name
 IPR000418  Ets domain
 IPR003118  Pointed domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007296 vitellogenesis IMP
 biological_processGO:0022008 neurogenesis IMP
 biological_processGO:0030154 cell differentiation IDA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 biological_processGO:0071425 hematopoietic stem cell proliferation IEA
 biological_processGO:0097152 mesenchymal cell apoptotic process IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000222 decreased neutrophil count "fewer than normal neutrophil numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Etv6tm2.1Sho/Etv6tm2.1Sho
Genetic Background: involves: 129S1/Sv

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

 MP:0000229 abnormal megakaryocyte differentiation "atypical process of formation and development these very large bone marrow cells which release mature platelets" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Etv6tm2.1Sho/Etv6tm2.1Sho
Genetic Background: involves: 129S1/Sv

 MP:0000245 abnormal erythropoiesis "atypical process of red blood cell formation" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, tc:Teresa Chu , Mouse Genome Informatics Curator]
Show

Allelic Composition: Etv6tm2.1Sho/Etv6tm2.1Sho
Genetic Background: involves: 129S1/Sv

 MP:0000291 enlarged pericardium "extended fibroserous membrane covering the heart and beginning of the great vessels" [J:29971]
Show

Allelic Composition: Engtm1Hma/Engtm1Hma
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0001577 anemia "less than normal levels of red blood cells, hemoglobin or volume of packed red blood cells " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:53370]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Runx1tm3Spe/Runx1tm3Spe,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * 129S4/SvJae * C57BL/6 * CBA

 MP:0001718 abnormal yolk sac "malformed extraembryonic tissue which contributes to hematopoietic circulation" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:cls, J:12623]
Show

Allelic Composition: Engtm1Hma/Engtm1Hma
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0001719 absent vitelline blood vessels "missing vasculature of the yolk sac" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:62571, J:12623]
Show

Allelic Composition: Engtm1Hma/Engtm1Hma
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

Allelic Composition: Etv6tm2.1Sho/Etv6tm2.1Sho
Genetic Background: involves: 129S1/Sv

 MP:0001732 postnatal growth retardation "slow or limited development after birth " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6tm1(RUNX1)Haho
Genetic Background: B6.129S1-Etv6tm1(Runx1)Haho

 MP:0001802 arrested B cell development "inability to produce mature B cells, and accumulation of B cell precursors" [J:52607]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

 MP:0001884 mammary alveolar hyperplasia 
Show

Allelic Composition: Nfe2l2tm1Mym/Nfe2l2tm1Mym,n-TUtca2tm2Mym/n-TUtca2tm2.1Mym,Lyz2tm1(cre)Ifo/Lyz2+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6 * DBA/2

 MP:0002026 leukemia "progressive proliferation of abnormal leukocytes in hematopoietic tissues, organs and blood" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:18542]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Gata1-cre)1Sho/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CD-1 * Swiss Webster

Allelic Composition: Etv6tm1.1(RUNX1,hsb5)Lvdw/Etv6+
Genetic Background: involves: 129P2/OlaHsd * 129S4/SvJaeSor * C57BL/6J

Allelic Composition: Etv6tm1.1(RUNX1,hsb5)Lvdw/Etv6+,TgTn(sb-T2/Onc)76Dla/0
Genetic Background: involves: 129P2/OlaHsd * 129S4/SvJaeSor * C57BL/6J * FVB/N

 MP:0002082 postnatal lethality "premature death anytime after postnatal day 1 to weaning age (3 weeks)" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6tm1(RUNX1)Haho
Genetic Background: B6.129S1-Etv6tm1(Runx1)Haho

 MP:0002083 premature death "death after 3 weeks of age, but before normal life span" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Etv6tm3(NTRK3)Sho/Etv6+,Tg(Wap-cre)11738Mam/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * SJL

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Runx1tm3Spe/Runx1tm3Spe,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * 129S4/SvJae * C57BL/6 * CBA

Allelic Composition: Etv6tm1.1(RUNX1,hsb5)Lvdw/Etv6+,TgTn(sb-T2/Onc)76Dla/0
Genetic Background: involves: 129P2/OlaHsd * 129S4/SvJaeSor * C57BL/6J * FVB/N

 MP:0002123 abnormal hematopoiesis "abnormal development of the enucleated fetal and adult erythrocytes that develop in the aorta, genital ridge and mesonephros region and later in the fetal and adult liver" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Gata1-cre)1Sho/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CD-1 * Swiss Webster

 MP:0002144 abnormal B lymphocyte development "atypical production of or inability to produce mature B cells, and/or accumulation of B cell precursors" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6tm1(RUNX1)Haho
Genetic Background: B6.129S1-Etv6tm1(Runx1)Haho

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Etv6tm2.1Sho/Etv6tm2.1Sho
Genetic Background: involves: 129S1/Sv

 MP:0002401 abnormal lymphopoiesis "atypcial formation of lymphocytes and plasma cells from lymphoid stem cells which develop from the pluripotent hematopoietic stem cells in the bone marrow; these lymphoid stem cells differentiate into T-lymphocytes; B-lymphocytes; plasma cells; or NK-cells (natural killer cells), depending on the organ or tissues to which they migrate" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Gata1-cre)1Sho/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CD-1 * Swiss Webster

 MP:0002414 abnormal myeloblast morphology/development "anomalous structure, formation, or numbers of the cells found in the bone marrow that give rise to the granulocyte line of blood cells" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

 MP:0003179 decreased platelet count "fewer than the normal numbers of the non-nucleated cells found in the blood and involved in blood coagulation " [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, hdene:Howard Dene , Mouse Genome Informatics Curator, J:93052]
Show

Allelic Composition: Etv6tm2.1Sho/Etv6tm2.1Sho
Genetic Background: involves: 129S1/Sv

Allelic Composition: Etv6tm2Sho/Etv6tm2Sho,Tg(Mx1-cre)1Cgn/?
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

 MP:0003288 intestinal edema "an accumulation of an excessive amount of serous fluid in the intestine or intestinal cells " [ncbi:Matthew Mailman, NCBI request]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6tm1(RUNX1)Haho
Genetic Background: B6.129S1-Etv6tm1(Runx1)Haho

 MP:0003984 embryonic growth retardation "slow or limited development before birth" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Engtm1Hma/Engtm1Hma
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0004499 increased incidence of chemically-induced tumors "higher than normal frequency of tumor incidence induced by one or more chemical carcinogens or mutagens" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

 MP:0004809 increased hematopoietic stem cell number "greater cell count of the multipotent, self-renewing stem cells found in the bone marrow and the fetal liver; these give rise to all the types of both the myeloid and lymphoid cell lineages" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Vav1-cre)1Graf/0
Genetic Background: involves: 129S1/Sv * C57BL/6

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Runx1tm3Spe/Runx1+,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * 129S4/SvJae * C57BL/6 * CBA

 MP:0004810 decreased hematopoietic stem cell number "reduced cell count of the multipotent, self-renewing stem cells found in the bone marrow and the fetal liver; these give rise to all the types of both the myeloid and lymphoid cell lineages" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Runx1tm3Spe/Runx1tm3Spe,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * 129S4/SvJae * C57BL/6 * CBA

 MP:0005016 decreased lymphocyte number "fewer than normal white blood cell numbers " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

 MP:0005017 decreased B cell number "fewer than normal B cell numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Vav1-cre)1Graf/0
Genetic Background: involves: 129S1/Sv * C57BL/6

 MP:0005481 chronic myelocytic leukemia "a heterogeneous group of myeloproliferative disorders that may evolve into acute leukemia in late stages " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Etv6tm3(NTRK3)Sho/Etv6+,Tg(Wap-cre)11738Mam/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * SJL

 MP:0006410 abnormal common myeloid progenitor cell morphology "anomaly in the structure of the hematopoietic stem cells that are capable of forming any of the myeloid lineage cells (erythrocytes, granulocytes, thrombocytes, monocytes, and mast cells) but not cells of the lymphoid lineage" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

 MP:0008208 decreased pro-B cell number "reduced number of the progenitor cells of the B cell lineage, with some lineage specific activity such as early stages of recombination of B cell receptor genes, but are not yet fully committed to the B cell lineage until the expression of PAX5 occurs" [CL:0000826, ISBN:0781735149, MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Vav1-cre)1Graf/0
Genetic Background: involves: 129S1/Sv * C57BL/6

 MP:0008209 decreased pre-B cell number "reduced number of the cells in the B lymphocyte lineage that have undergone VDJ rearrangement of the immunoglobulin heavy chain and are in the process of V-J rearrangement of the light chain: these cells express mu heavy chain on the cell surface" [ISBN:0-8153-1691-7 "Immunobiology, The Immune System in Health and Disease", MGI:cwg "Carroll-Ann W. Goldsmith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Vav1-cre)1Graf/0
Genetic Background: involves: 129S1/Sv * C57BL/6

 MP:0008249 abnormal common lymphocyte progenitor cell morphology "any structural anomaly of a progenitor cell committed to the lymphoid lineage" [CL:0000051, PMID:10407577]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

 MP:0008973 decreased erythroid progenitor cell number "reduced numbers of progenitors of the erythrocyte lineage" [CL:0000038, MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

 MP:0009278 abnormal bone marrow cell physiology "any functional anomaly of any of the cells found in the blood" [MGI:tmeehan "Terry Meehan, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

 MP:0010299 increased mammary gland tumor incidence "greater than the expected number of neoplasms in the mammary gland, usually in the form of a distinct mass, in a specific population in a given time period" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Nfe2l2tm1Mym/Nfe2l2tm1Mym,n-TUtca2tm2Mym/n-TUtca2tm2.1Mym,Lyz2tm1(cre)Ifo/Lyz2+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6 * DBA/2

Allelic Composition: Etv6tm3(NTRK3)Sho/Etv6+,Tg(Wap-cre)11738Mam/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * SJL

 MP:0010373 myeloid hyperplasia "greater than normal number of nucleated cells of the myeloid lineage (a monocyte, granulocyte, or mast cell), found in blood or other tissue" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

 MP:0011091 complete prenatal lethality "death of all organisms of a given genotype in a population between fertilization and birth (Mus: approximately E18.5)" [MGI:csmith]
Show

Allelic Composition: Etv6tm2.1Sho/Etv6tm2.1Sho
Genetic Background: involves: 129S1/Sv

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6tm1(RUNX1)Haho
Genetic Background: B6.129S1-Etv6tm1(Runx1)Haho

 MP:0011098 complete embryonic lethality during organogenesis "death of all organisms of a given genotype in a population between embryo turning and the completion of organogenesis (Mus: E9 to less than E14)" [MGI:csmith]
Show

Allelic Composition: Engtm1Hma/Engtm1Hma
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

Allelic Composition: Etv6tm1.1(RUNX1,hsb5)Lvdw/Etv6tm1.1(RUNX1,hsb5)Lvdw
Genetic Background: involves: 129P2/OlaHsd * 129S4/SvJaeSor * C57BL/6J

 MP:0011108 partial embryonic lethality during organogenesis "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between embryo turning and the completion of organogenesis (Mus: E9 to less than E14)" [MGI:csmith]
Show

Allelic Composition: Etv6tm2.1Sho/Etv6tm2.1Sho
Genetic Background: involves: 129S1/Sv

Allelic Composition: Etv6tm1(RUNX1)Haho/Etv6+,Tg(Gata1-cre)1Sho/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CD-1 * Swiss Webster

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Etv6tm1.1(RUNX1,hsb5)Lvdw/Etv6tm1.1(RUNX1,hsb5)Lvdw
Genetic Background: involves: 129P2/OlaHsd * 129S4/SvJaeSor * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr