ENSGALG00000016947


Gallus gallus

Features
Gene ID: ENSGALG00000016947
  
Biological name :ELF1
  
Synonyms : ELF1 / ETS-related transcription factor Elf-1
  
Possible biological names infered from orthology : E74 like ETS transcription factor 1 / P32519 / Q60775
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 165748041
Gene end: 165834895
  
Corresponding Affymetrix probe sets: Gga.16786.1.S1_at (Chicken Array)   Gga.16786.1.S1_s_at (Chicken Array)   Gga.4849.1.A1_at (Chicken Array)   Gga.4849.1.S1_at (Chicken Array)   GgaAffx.11523.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027339
NCBI entrez gene - 418828     See in Manteia.
RefSeq - XM_015275466
RefSeq - NM_001006269
RefSeq - XM_015275460
RefSeq - XM_015275463
RefSeq - XM_015275417
RefSeq - XM_015275420
RefSeq - XM_015275429
RefSeq - XM_015275433
RefSeq - XM_015275437
RefSeq - XM_015275440
RefSeq - XM_015275445
RefSeq - XM_015275446
RefSeq - XM_015275454
RefSeq Peptide - NP_001006269
swissprot - F1NXG3
Ensembl - ENSGALG00000016947
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ELF1ENSG00000120690Homo sapiens
 Elf1ENSMUSG00000036461Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ELF2 / E74 like ETS transcription factor 2 / Q15723* / Q9JHC9* / ETS-related transcription factor Elf-2 *ENSGALG0000000977436
ETV6 / ETS variant 6 / P41212* / P97360* / Transcription factor ETV6 *ENSGALG0000001292110
ELF3 / E74 like ETS transcription factor 3 / P78545* / Q3UPW2* / ETS-related transcription factor Elf-3 *ENSGALG0000000061610
ETV7 / ETS variant 7 / Q9Y603*ENSGALG0000000050410
EHF / ETS homologous factor / O70273* / Q9NZC4*ENSGALG000000078179
ENSGALG000000027929
ELF5 / E74 like ETS transcription factor 5 / Q8VDK3* / Q9UKW6* / ETS-related transcription factor Elf-5 *ENSGALG000000358677


Protein motifs (from Interpro)
Interpro ID Name
 IPR000418  Ets domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR022084  Transcription factor Elf, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001817 regulation of cytokine production IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0050860 negative regulation of T cell receptor signaling pathway IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
RUNX1 regulates transcription of genes involved in interleukin signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000016022 RUNX1 / runt related transcription factor 1 / Q01196*  / reaction / complex






 

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