ENSGALG00000012988


Gallus gallus

Features
Gene ID: ENSGALG00000012988
  
Biological name :B4GALNT3
  
Synonyms : B4GALNT3 / beta-1,4-N-acetyl-galactosaminyltransferase 3
  
Possible biological names infered from orthology : Beta-1,4-N-acetylgalactosaminyltransferase 3 / Q6L8S8 / Q6L9W6
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 60369118
Gene end: 60426095
  
Corresponding Affymetrix probe sets: Gga.13310.1.S1_at (Chicken Array)   Gga.2634.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021171
NCBI entrez gene - 418150     See in Manteia.
RefSeq - XM_416381
swissprot - F1NN69
Ensembl - ENSGALG00000012988
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 b4galnt3aENSDARG00000078749Danio rerio
 b4galnt3bENSDARG00000058939Danio rerio
 Q6L9W6ENSG00000139044Homo sapiens
 Q6L8S8ENSMUSG00000041372Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
B4GALNT4 / beta-1,4-N-acetyl-galactosaminyltransferase 4 / Q766D5* / Q76KP1* / N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 *ENSGALG0000000425045
CHSY1 / chondroitin sulfate synthase 1 / Q6ZQ11* / Q86X52*ENSGALG0000002646811
CHPF / chondroitin polymerizing factor / Q6IQX7* / Q8IZ52* / Chondroitin sulfate synthase 2 *ENSGALG000000329158
CSGALNACT2 / chondroitin sulfate N-acetylgalactosaminyltransferase 2 / Q8C1F4* / Q8N6G5*ENSGALG000000025438
CHSY3 / chondroitin sulfate synthase 3 / Q5DTK1* / Q70JA7*ENSGALG000000268998
CSGALNACT1 / chondroitin sulfate N-acetylgalactosaminyltransferase 1 / Q8BJQ9* / Q8TDX6*ENSGALG000000101258
CHPF2 / chondroitin polymerizing factor 2 / Q9P2E5*ENSGALG000000364773


Protein motifs (from Interpro)
Interpro ID Name
 IPR008428  Chondroitin N-acetylgalactosaminyltransferase
 IPR011658  PA14 domain
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0032580 Golgi cisterna membrane IEA
 molecular_functionGO:0008376 acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0033842 N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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