ENSGALG00000026468


Gallus gallus

Features
Gene ID: ENSGALG00000026468
  
Biological name :CHSY1
  
Synonyms : chondroitin sulfate synthase 1 / CHSY1
  
Possible biological names infered from orthology : Q6ZQ11 / Q86X52
  
Species: Gallus gallus
  
Chr. number: 10
Strand: -1
Band:
Gene start: 17570918
Gene end: 17630894
  
Corresponding Affymetrix probe sets: Gga.11858.1.S1_at (Chicken Array)   GgaAffx.22171.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042967
NCBI entrez gene - 415521     See in Manteia.
RefSeq - XM_015292258
swissprot - R4GL94
Ensembl - ENSGALG00000026468
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chsy1ENSDARG00000079027Danio rerio
 CHSY1ENSG00000131873Homo sapiens
 Chsy1ENSMUSG00000032640Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CHSY3 / chondroitin sulfate synthase 3 / Q5DTK1* / Q70JA7*ENSGALG0000002689939
CHPF / chondroitin polymerizing factor / Q6IQX7* / Q8IZ52* / Chondroitin sulfate synthase 2 *ENSGALG0000003291517
CSGALNACT2 / chondroitin sulfate N-acetylgalactosaminyltransferase 2 / Q8C1F4* / Q8N6G5*ENSGALG0000000254315
CSGALNACT1 / chondroitin sulfate N-acetylgalactosaminyltransferase 1 / Q8BJQ9* / Q8TDX6*ENSGALG0000001012514
B4GALNT4 / beta-1,4-N-acetyl-galactosaminyltransferase 4 / Q766D5* / Q76KP1* / N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 *ENSGALG0000000425013
B4GALNT3 / beta-1,4-N-acetyl-galactosaminyltransferase 3 / Q6L8S8* / Q6L9W6* / Beta-1,4-N-acetylgalactosaminyltransferase 3 *ENSGALG0000001298811
CHPF2 / chondroitin polymerizing factor 2 / Q9P2E5*ENSGALG000000364777


Protein motifs (from Interpro)
Interpro ID Name
 IPR008428  Chondroitin N-acetylgalactosaminyltransferase
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002063 chondrocyte development IEA
 biological_processGO:0009954 proximal/distal pattern formation IEA
 biological_processGO:0030206 chondroitin sulfate biosynthetic process IEA
 biological_processGO:0030279 negative regulation of ossification IEA
 biological_processGO:0045880 positive regulation of smoothened signaling pathway IEA
 biological_processGO:0051216 cartilage development IEA
 biological_processGO:0051923 sulfation IEA
 biological_processGO:0060349 bone morphogenesis IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032580 Golgi cisterna membrane IEA
 molecular_functionGO:0008376 acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0047238 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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