ENSDARG00000058939


Danio rerio

Features
Gene ID: ENSDARG00000058939
  
Biological name :b4galnt3b
  
Synonyms : b4galnt3b / beta-1,4-N-acetyl-galactosaminyl transferase 3b
  
Possible biological names infered from orthology : B4GALNT3 / beta-1,4-N-acetyl-galactosaminyltransferase 3 / Beta-1,4-N-acetylgalactosaminyltransferase 3 / Q6L8S8 / Q6L9W6
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 6558146
Gene end: 6619842
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000102026
Ensembl peptide - ENSDARP00000133891
NCBI entrez gene - 553524     See in Manteia.
RefSeq - XM_001342847
RefSeq - XM_021467740
swissprot - F1QYH1
swissprot - A0A0R4IF14
ZFIN ID - ZDB-GENE-030131-8615
Ensembl - ENSDARG00000058939
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 B4GALNT3ENSGALG00000012988Gallus gallus
 Q6L9W6ENSG00000139044Homo sapiens
 Q6L8S8ENSMUSG00000041372Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
b4galnt4a / beta-1,4-N-acetyl-galactosaminyl transferase 4a / Q76KP1* / Q766D5* / B4GALNT4* / beta-1,4-N-acetyl-galactosaminyltransferase 4* / N-acetyl-beta-glucosaminyl-glycoprotein 4-beta...ENSDARG0000004615038
b4galnt4b / beta-1,4-N-acetyl-galactosaminyl transferase 4b / Q76KP1* / Q766D5* / B4GALNT4* / beta-1,4-N-acetyl-galactosaminyltransferase 4* / N-acetyl-beta-glucosaminyl-glycoprotein 4-beta...ENSDARG0000007670137
b4galnt3a / beta-1,4-N-acetyl-galactosaminyl transferase 3a / Q6L9W6* / Q6L8S8* / B4GALNT3* / beta-1,4-N-acetyl-galactosaminyltransferase 3* / Beta-1,4-N-acetylgalactosaminyltransferase 3 *ENSDARG0000007874929
chsy3 / chondroitin sulfate synthase 3 / Q70JA7*ENSDARG0000006947210
chsy1 / chondroitin sulfate synthase 1 / Q6ZQ11* / Q86X52*ENSDARG000000790279
chpfa / chondroitin polymerizing factor aENSDARG000000783929
chpfb / chondroitin polymerizing factor b / CHPF* / Q8IZ52* / Q6IQX7* / chondroitin polymerizing factor* / Chondroitin sulfate synthase 2 *ENSDARG000000780379
csgalnact1a / chondroitin sulfate N-acetylgalactosaminyltransferase 1a / Q8TDX6* / CSGALNACT1* / chondroitin sulfate N-acetylgalactosaminyltransferase 1*ENSDARG000000405358
chpf2 / chondroitin polymerizing factor 2 / Q9P2E5*ENSDARG000000599618
csgalnact2 / chondroitin sulfate N-acetylgalactosaminyltransferase 2 / Q8C1F4* / Q8N6G5*ENSDARG000000614007
csgalnact1b / chondroitin sulfate N-acetylgalactosaminyltransferase 1b / Q8TDX6* / CSGALNACT1* / chondroitin sulfate N-acetylgalactosaminyltransferase 1*ENSDARG000000892336


Protein motifs (from Interpro)
Interpro ID Name
 IPR008428  Chondroitin N-acetylgalactosaminyltransferase
 IPR011658  PA14 domain
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0032580 Golgi cisterna membrane IEA
 molecular_functionGO:0008376 acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0033842 N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr