ENSDARG00000069472


Danio rerio

Features
Gene ID: ENSDARG00000069472
  
Biological name :chsy3
  
Synonyms : chondroitin sulfate synthase 3 / chsy3
  
Possible biological names infered from orthology : Q5DTK1 / Q70JA7
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 16592851
Gene end: 16748593
  
Corresponding Affymetrix probe sets: Dr.19.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000091916
Ensembl peptide - ENSDARP00000147734
NCBI entrez gene - 368477     See in Manteia.
RefSeq - NM_001089348
RefSeq Peptide - NP_001082817
swissprot - F1QEX3
swissprot - A4IG33
ZFIN ID - ZDB-GENE-030616-4
Ensembl - ENSDARG00000069472
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHSY3ENSGALG00000026899Gallus gallus
 CHSY3ENSG00000198108Homo sapiens
 Chsy3ENSMUSG00000058152Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chsy1 / chondroitin sulfate synthase 1 / Q6ZQ11* / Q86X52*ENSDARG0000007902762
chpf2 / chondroitin polymerizing factor 2 / Q9P2E5*ENSDARG0000005996121
chpfb / chondroitin polymerizing factor b / CHPF* / Q8IZ52* / Q6IQX7* / chondroitin polymerizing factor* / Chondroitin sulfate synthase 2 *ENSDARG0000007803720
chpfa / chondroitin polymerizing factor aENSDARG0000007839220
csgalnact1a / chondroitin sulfate N-acetylgalactosaminyltransferase 1a / Q8TDX6* / CSGALNACT1* / chondroitin sulfate N-acetylgalactosaminyltransferase 1*ENSDARG0000004053518
csgalnact2 / chondroitin sulfate N-acetylgalactosaminyltransferase 2 / Q8C1F4* / Q8N6G5*ENSDARG0000006140018
b4galnt4b / beta-1,4-N-acetyl-galactosaminyl transferase 4b / Q76KP1* / Q766D5* / B4GALNT4* / beta-1,4-N-acetyl-galactosaminyltransferase 4* / N-acetyl-beta-glucosaminyl-glycoprotein 4-beta...ENSDARG0000007670116
b4galnt4a / beta-1,4-N-acetyl-galactosaminyl transferase 4a / Q76KP1* / Q766D5* / B4GALNT4* / beta-1,4-N-acetyl-galactosaminyltransferase 4* / N-acetyl-beta-glucosaminyl-glycoprotein 4-beta...ENSDARG0000004615015
b4galnt3a / beta-1,4-N-acetyl-galactosaminyl transferase 3a / Q6L9W6* / Q6L8S8* / B4GALNT3* / beta-1,4-N-acetyl-galactosaminyltransferase 3* / Beta-1,4-N-acetylgalactosaminyltransferase 3 *ENSDARG0000007874913
b4galnt3b / beta-1,4-N-acetyl-galactosaminyl transferase 3b / Q6L9W6* / Q6L8S8* / B4GALNT3* / beta-1,4-N-acetyl-galactosaminyltransferase 3* / Beta-1,4-N-acetylgalactosaminyltransferase 3 *ENSDARG0000005893913
csgalnact1b / chondroitin sulfate N-acetylgalactosaminyltransferase 1b / Q8TDX6* / CSGALNACT1* / chondroitin sulfate N-acetylgalactosaminyltransferase 1*ENSDARG0000008923313


Protein motifs (from Interpro)
Interpro ID Name
 IPR003378  Fringe-like
 IPR008428  Chondroitin N-acetylgalactosaminyltransferase
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0032580 Golgi cisterna membrane IEA
 molecular_functionGO:0008376 acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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