ENSG00000198108


Homo sapiens

Features
Gene ID: ENSG00000198108
  
Biological name :CHSY3
  
Synonyms : chondroitin sulfate synthase 3 / CHSY3 / Q70JA7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q23.3
Gene start: 129904472
Gene end: 130186634
  
Corresponding Affymetrix probe sets: 242100_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000302629
NCBI entrez gene - 337876     See in Manteia.
OMIM - 609963
RefSeq - NM_175856
RefSeq Peptide - NP_787052
swissprot - Q70JA7
Ensembl - ENSG00000198108
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chsy3ENSDARG00000069472Danio rerio
 CHSY3ENSGALG00000026899Gallus gallus
 Chsy3ENSMUSG00000058152Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CHSY1 / Q86X52 / chondroitin sulfate synthase 1ENSG0000013187362
CHPF / Q8IZ52 / chondroitin polymerizing factorENSG0000012398919
CHPF2 / Q9P2E5 / chondroitin polymerizing factor 2ENSG0000003310019
Q8TDX6 / CSGALNACT1 / chondroitin sulfate N-acetylgalactosaminyltransferase 1ENSG0000014740818
Q8N6G5 / CSGALNACT2 / chondroitin sulfate N-acetylgalactosaminyltransferase 2ENSG0000016982617
Q6L9W6 / B4GALNT3 / beta-1,4-N-acetyl-galactosaminyltransferase 3ENSG0000013904416
Q76KP1 / B4GALNT4 / beta-1,4-N-acetyl-galactosaminyltransferase 4ENSG0000018227216


Protein motifs (from Interpro)
Interpro ID Name
 IPR008428  Chondroitin N-acetylgalactosaminyltransferase
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030206 chondroitin sulfate biosynthetic process TAS
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032580 Golgi cisterna membrane IEA
 molecular_functionGO:0008376 acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0047238 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity TAS
 molecular_functionGO:0050510 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity TAS


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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