ENSG00000147408


Homo sapiens

Features
Gene ID: ENSG00000147408
  
Biological name :CSGALNACT1
  
Synonyms : chondroitin sulfate N-acetylgalactosaminyltransferase 1 / CSGALNACT1 / Q8TDX6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: p21.3
Gene start: 19404161
Gene end: 19758029
  
Corresponding Affymetrix probe sets: 1569387_at (Human Genome U133 Plus 2.0 Array)   219049_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000428089
Ensembl peptide - ENSP00000427740
Ensembl peptide - ENSP00000428216
Ensembl peptide - ENSP00000429809
Ensembl peptide - ENSP00000429130
Ensembl peptide - ENSP00000428774
Ensembl peptide - ENSP00000330805
Ensembl peptide - ENSP00000381084
Ensembl peptide - ENSP00000411816
NCBI entrez gene - 55790     See in Manteia.
OMIM - 616615
RefSeq - XM_017013639
RefSeq - XM_006716361
RefSeq - XM_006716362
RefSeq - XM_006716363
RefSeq - XM_006716364
RefSeq - XM_011544578
RefSeq - XM_011544579
RefSeq - XM_011544580
RefSeq - XM_011544582
RefSeq - XM_011544583
RefSeq - XM_011544584
RefSeq - XM_011544585
RefSeq - XM_017013623
RefSeq - XM_017013624
RefSeq - XM_017013625
RefSeq - XM_017013626
RefSeq - XM_017013627
RefSeq - XM_017013628
RefSeq - XM_017013629
RefSeq - XM_017013630
RefSeq - XM_017013631
RefSeq - XM_017013632
RefSeq - XM_017013633
RefSeq - XM_017013634
RefSeq - XM_017013635
RefSeq - XM_017013636
RefSeq - XM_017013637
RefSeq - XM_017013638
RefSeq - NM_001130518
RefSeq - NM_001354476
RefSeq - NM_001354477
RefSeq - NM_001354483
RefSeq - NM_001354484
RefSeq - NM_001354485
RefSeq - NM_001354487
RefSeq - NM_001354488
RefSeq - NM_001354489
RefSeq - NM_001354490
RefSeq - NM_018371
RefSeq - XM_006716358
RefSeq - XM_006716359
RefSeq - XM_006716360
RefSeq Peptide - NP_001341414
RefSeq Peptide - NP_001341416
RefSeq Peptide - NP_001341417
RefSeq Peptide - NP_001341418
RefSeq Peptide - NP_001341419
RefSeq Peptide - NP_001341423
RefSeq Peptide - NP_001341424
RefSeq Peptide - NP_001341425
RefSeq Peptide - NP_001341426
RefSeq Peptide - NP_001341427
RefSeq Peptide - NP_001341428
RefSeq Peptide - NP_060841
RefSeq Peptide - NP_001341420
RefSeq Peptide - NP_001341421
RefSeq Peptide - NP_001123990
RefSeq Peptide - NP_001341404
RefSeq Peptide - NP_001341405
RefSeq Peptide - NP_001341406
RefSeq Peptide - NP_001341409
RefSeq Peptide - NP_001341410
RefSeq Peptide - NP_001341412
RefSeq Peptide - NP_001341413
swissprot - E5RGB2
swissprot - E5RJB6
swissprot - E5RGK2
swissprot - Q8TDX6
swissprot - E5RK93
Ensembl - ENSG00000147408
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 csgalnact1aENSDARG00000040535Danio rerio
 csgalnact1bENSDARG00000089233Danio rerio
 CSGALNACT1ENSGALG00000010125Gallus gallus
 Q8BJQ9ENSMUSG00000036356Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8N6G5 / CSGALNACT2 / chondroitin sulfate N-acetylgalactosaminyltransferase 2ENSG0000016982661
CHSY3 / Q70JA7 / chondroitin sulfate synthase 3ENSG0000019810830
CHSY1 / Q86X52 / chondroitin sulfate synthase 1ENSG0000013187329
Q6L9W6 / B4GALNT3 / beta-1,4-N-acetyl-galactosaminyltransferase 3ENSG0000013904419
CHPF / Q8IZ52 / chondroitin polymerizing factorENSG0000012398918
CHPF2 / Q9P2E5 / chondroitin polymerizing factor 2ENSG0000003310018
Q76KP1 / B4GALNT4 / beta-1,4-N-acetyl-galactosaminyltransferase 4ENSG0000018227217


Protein motifs (from Interpro)
Interpro ID Name
 IPR008428  Chondroitin N-acetylgalactosaminyltransferase
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001958 endochondral ossification IEA
 biological_processGO:0007399 nervous system development NAS
 biological_processGO:0008037 cell recognition NAS
 biological_processGO:0008283 cell proliferation NAS
 biological_processGO:0009653 anatomical structure morphogenesis NAS
 biological_processGO:0015014 heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process NAS
 biological_processGO:0019276 UDP-N-acetylgalactosamine metabolic process IDA
 biological_processGO:0030166 proteoglycan biosynthetic process ISS
 biological_processGO:0030198 extracellular matrix organization NAS
 biological_processGO:0030204 chondroitin sulfate metabolic process IEA
 biological_processGO:0030206 chondroitin sulfate biosynthetic process IDA
 biological_processGO:0030210 heparin biosynthetic process NAS
 biological_processGO:0046398 UDP-glucuronate metabolic process IDA
 biological_processGO:0050650 chondroitin sulfate proteoglycan biosynthetic process ISS
 biological_processGO:0050651 dermatan sulfate proteoglycan biosynthetic process ISS
 biological_processGO:0050653 chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IDA
 biological_processGO:0051216 cartilage development IEA
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005622 intracellular IC
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030173 integral component of Golgi membrane NAS
 cellular_componentGO:0032580 Golgi cisterna membrane IEA
 molecular_functionGO:0008376 acetylgalactosaminyltransferase activity ISS
 molecular_functionGO:0008955 peptidoglycan glycosyltransferase activity IDA
 molecular_functionGO:0015020 glucuronosyltransferase activity IDA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding NAS
 molecular_functionGO:0047237 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0047238 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity TAS


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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