ENSG00000033100


Homo sapiens

Features
Gene ID: ENSG00000033100
  
Biological name :CHPF2
  
Synonyms : chondroitin polymerizing factor 2 / CHPF2 / Q9P2E5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q36.1
Gene start: 151232489
Gene end: 151238827
  
Corresponding Affymetrix probe sets: 221799_at (Human Genome U133 Plus 2.0 Array)   55093_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000420204
Ensembl peptide - ENSP00000035307
Ensembl peptide - ENSP00000418914
Ensembl peptide - ENSP00000419769
NCBI entrez gene - 54480     See in Manteia.
OMIM - 608037
RefSeq - NM_001284295
RefSeq - NM_019015
RefSeq Peptide - NP_001271224
RefSeq Peptide - NP_061888
swissprot - Q9P2E5
swissprot - C9JZF7
swissprot - G5E9W2
swissprot - H7C5L5
Ensembl - ENSG00000033100
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chpf2ENSDARG00000059961Danio rerio
 CHPF2ENSGALG00000036477Gallus gallus
 Chpf2ENSMUSG00000038181Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CHPF / Q8IZ52 / chondroitin polymerizing factorENSG0000012398958
CHSY3 / Q70JA7 / chondroitin sulfate synthase 3ENSG0000019810822
CHSY1 / Q86X52 / chondroitin sulfate synthase 1ENSG0000013187322
Q76KP1 / B4GALNT4 / beta-1,4-N-acetyl-galactosaminyltransferase 4ENSG0000018227215
Q6L9W6 / B4GALNT3 / beta-1,4-N-acetyl-galactosaminyltransferase 3ENSG0000013904415
Q8TDX6 / CSGALNACT1 / chondroitin sulfate N-acetylgalactosaminyltransferase 1ENSG0000014740813
Q8N6G5 / CSGALNACT2 / chondroitin sulfate N-acetylgalactosaminyltransferase 2ENSG0000016982613


Protein motifs (from Interpro)
Interpro ID Name
 IPR008428  Chondroitin N-acetylgalactosaminyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030206 chondroitin sulfate biosynthetic process TAS
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032580 Golgi cisterna membrane IEA
 molecular_functionGO:0008376 acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0050510 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity TAS


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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