ENSMUSG00000038181


Mus musculus

Features
Gene ID: ENSMUSG00000038181
  
Biological name :Chpf2
  
Synonyms : chondroitin polymerizing factor 2 / Chpf2
  
Possible biological names infered from orthology : Q9P2E5
  
Species: Mus musculus
  
Chr. number: 5
Strand: 1
Band: A3
Gene start: 24586741
Gene end: 24594556
  
Corresponding Affymetrix probe sets: 10520234 (MoGene1.0st)   1452170_at (Mouse Genome 430 2.0 Array)   1453846_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000143185
Ensembl peptide - ENSMUSP00000085633
Ensembl peptide - ENSMUSP00000112804
NCBI entrez gene - 100910     See in Manteia.
MGI - MGI:1917522
RefSeq - NM_133913
RefSeq - XM_017320583
RefSeq Peptide - NP_598674
swissprot - A0A0G2JFI5
swissprot - Q3UU43
Ensembl - ENSMUSG00000038181
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chpf2ENSDARG00000059961Danio rerio
 CHPF2ENSGALG00000036477Gallus gallus
 CHPF2ENSG00000033100Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Chpf / Q6IQX7 / Chondroitin sulfate synthase 2 / Q8IZ52* / chondroitin polymerizing factor*ENSMUSG0000003299757
Chsy3 / Q5DTK1 / Chondroitin sulfate synthase 3 / Q70JA7*ENSMUSG0000005815222
Chsy1 / Q6ZQ11 / Chondroitin sulfate synthase 1 / Q86X52*ENSMUSG0000003264021
Q6L8S8 / B4galnt3 / Beta-1,4-N-acetylgalactosaminyltransferase 3 / Q6L9W6* / beta-1,4-N-acetyl-galactosaminyltransferase 3*ENSMUSG0000004137214
Q766D5 / B4galnt4 / N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 / Q76KP1* / beta-1,4-N-acetyl-galactosaminyltransferase 4*ENSMUSG0000005562914
Q8C1F4 / Csgalnact2 / Chondroitin sulfate N-acetylgalactosaminyltransferase 2 / Q8N6G5*ENSMUSG0000004204213
Q8BJQ9 / Csgalnact1 / Chondroitin sulfate N-acetylgalactosaminyltransferase 1 / Q8TDX6*ENSMUSG0000003635613


Protein motifs (from Interpro)
Interpro ID Name
 IPR008428  Chondroitin N-acetylgalactosaminyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0032580 Golgi cisterna membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0008376 acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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