ENSGALG00000013090


Gallus gallus

Features
Gene ID: ENSGALG00000013090
  
Biological name :LOXL4
  
Synonyms : LOXL4 / lysyl oxidase like 4
  
Possible biological names infered from orthology : Lysyl oxidase homolog 4 / Q924C6 / Q96JB6
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 22249905
Gene end: 22254300
  
Corresponding Affymetrix probe sets: GgaAffx.20960.1.S1_at (Chicken Array)   GgaAffx.4470.1.S1_s_at (Chicken Array)   GgaAffx.8312.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021337
Ensembl peptide - ENSGALP00000057151
Ensembl peptide - ENSGALP00000055800
Ensembl peptide - ENSGALP00000051153
NCBI entrez gene - 769927     See in Manteia.
RefSeq - XM_004942178
RefSeq - XM_015288804
swissprot - E1BVA2
swissprot - A0A1D5PW22
swissprot - A0A1D5PSB5
swissprot - A0A1D5PEF1
Ensembl - ENSGALG00000013090
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LOXL4ENSG00000138131Homo sapiens
 Loxl4ENSMUSG00000025185Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LOXL2ENSGALG0000000040254
LOX / protein-lysine 6-oxidase precursor / P28300* / P28301* / lysyl oxidase* / Protein-lysine 6-oxidase *ENSGALG0000002806317
ENSGALG0000002824715
LOXL2* / P58022* / Q9Y4K0* / lysyl oxidase like 2* / Lysyl oxidase homolog 2 *ENSGALG0000003845814
MARCO / macrophage receptor MARCO / Q60754* / Q9UEW3* / macrophage receptor with collagenous structure*ENSGALG000000121199
CD6 / CD6 molecule / P30203* / Q61003* / T-cell differentiation antigen CD6 *ENSGALG000000430169
SCARA5 / scavenger receptor class A member 5 / Q6ZMJ2* / Q8K299*ENSGALG000000165809


Protein motifs (from Interpro)
Interpro ID Name
 IPR001190  SRCR domain
 IPR001695  Lysyl oxidase
 IPR016059  DNA ligase, ATP-dependent, conserved site
 IPR017448  SRCR-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 biological_processGO:0051103 DNA ligation involved in DNA repair IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0043235 receptor complex IEA
 molecular_functionGO:0003909 DNA ligase activity IEA
 molecular_functionGO:0005044 scavenger receptor activity IEA
 molecular_functionGO:0005507 copper ion binding IEA
 molecular_functionGO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEA


Pathways (from Reactome)
Pathway description
Elastic fibre formation
Crosslinking of collagen fibrils


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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