ENSGALG00000013408


Gallus gallus

Features
Gene ID: ENSGALG00000013408
  
Biological name :TMF1
  
Synonyms : TATA element modulatory factor 1 / TMF1
  
Possible biological names infered from orthology : B9EKI3 / P82094 / TATA element modulatory factor
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 15317303
Gene end: 15333557
  
Corresponding Affymetrix probe sets: Gga.4020.1.S1_at (Chicken Array)   Gga.8022.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021833
NCBI entrez gene - 426072     See in Manteia.
RefSeq - XM_423749
swissprot - F1NHB9
Ensembl - ENSGALG00000013408
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmf1ENSDARG00000057997Danio rerio
 TMF1ENSG00000144747Homo sapiens
 Tmf1ENSMUSG00000030059Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR022091  TATA element modulatory factor 1 TATA binding
 IPR022092  TATA element modulatory factor 1 DNA binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001675 acrosome assembly IEA
 biological_processGO:0001819 positive regulation of cytokine production IEA
 biological_processGO:0007286 spermatid development IEA
 biological_processGO:0007289 spermatid nucleus differentiation IEA
 biological_processGO:0008584 male gonad development IEA
 biological_processGO:0010629 negative regulation of gene expression IEA
 biological_processGO:0030317 flagellated sperm motility IEA
 biological_processGO:0032275 luteinizing hormone secretion IEA
 biological_processGO:0033327 Leydig cell differentiation IEA
 biological_processGO:0042742 defense response to bacterium IEA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 biological_processGO:0061136 regulation of proteasomal protein catabolic process IEA
 biological_processGO:0071407 cellular response to organic cyclic compound IEA
 biological_processGO:2000845 positive regulation of testosterone secretion IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA


Pathways (from Reactome)
Pathway description
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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