ENSDARG00000057997


Danio rerio

Features
Gene ID: ENSDARG00000057997
  
Biological name :tmf1
  
Synonyms : TATA element modulatory factor 1 / tmf1
  
Possible biological names infered from orthology : B9EKI3 / P82094 / TATA element modulatory factor
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 17757342
Gene end: 17782930
  
Corresponding Affymetrix probe sets: Dr.14269.1.A1_at (Zebrafish Array)   Dr.26148.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000075216
NCBI entrez gene - 445128     See in Manteia.
RefSeq - XM_021479595
RefSeq Peptide - NP_001003522
swissprot - F1REB9
ZFIN ID - ZDB-GENE-040801-25
Ensembl - ENSDARG00000057997
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMF1ENSGALG00000013408Gallus gallus
 TMF1ENSG00000144747Homo sapiens
 Tmf1ENSMUSG00000030059Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR022091  TATA element modulatory factor 1 TATA binding
 IPR022092  TATA element modulatory factor 1 DNA binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000057997 tmf1 / TATA element modulatory factor 1 / B9EKI3* / P82094* / TATA element modulatory factor *  / complex






 

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contact: otassy@igbmc.fr