ENSGALG00000014298


Gallus gallus

Features
Gene ID: ENSGALG00000014298
  
Biological name :RFC1
  
Synonyms : replication factor C subunit 1 / RFC1
  
Possible biological names infered from orthology : P35251 / replication factor C (activator 1) 1
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 69760276
Gene end: 69796593
  
Corresponding Affymetrix probe sets: Gga.1913.1.S1_s_at (Chicken Array)   GgaAffx.20533.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000023075
NCBI entrez gene - 422788     See in Manteia.
RefSeq - XM_015285652
RefSeq - NM_001006456
RefSeq - XM_015285650
RefSeq - XM_015285651
RefSeq - XM_015285648
RefSeq - XM_015285649
RefSeq Peptide - NP_001006456
swissprot - F1NEP9
Ensembl - ENSGALG00000014298
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rfc1ENSDARG00000054799Danio rerio
 RFC1ENSG00000035928Homo sapiens
 Rfc1ENSMUSG00000029191Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001357  BRCT domain
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR008921  DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
 IPR012178  Replication factor C subunit 1
 IPR013725  DNA replication factor RFC1, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0006281 DNA repair IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005663 DNA replication factor C complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0003689 DNA clamp loader activity IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
Translesion synthesis by REV1
Recognition of DNA damage by PCNA-containing replication complex
Translesion Synthesis by POLH
Polymerase switching on the C-strand of the telomere
PCNA-Dependent Long Patch Base Excision Repair
Translesion synthesis by POLK
Translesion synthesis by POLI
Termination of translesion DNA synthesis
HDR through Homologous Recombination (HRR)
Gap-filling DNA repair synthesis and ligation in GG-NER
Dual Incision in GG-NER
Dual incision in TC-NER
Gap-filling DNA repair synthesis and ligation in TC-NER
Polymerase switching


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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