ENSGALG00000015119


Gallus gallus

Features
Gene ID: ENSGALG00000015119
  
Biological name :SS18
  
Synonyms : protein SSXT isoform 1 / SS18
  
Possible biological names infered from orthology : Q15532 / Q62280 / SS18, nBAF chromatin remodeling complex subunit
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 104380897
Gene end: 104423704
  
Corresponding Affymetrix probe sets: Gga.7534.1.S1_at (Chicken Array)   GgaAffx.11579.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000024352
Ensembl peptide - ENSGALP00000057577
Ensembl peptide - ENSGALP00000052009
Ensembl peptide - ENSGALP00000051651
NCBI entrez gene - 421085     See in Manteia.
RefSeq - NM_001278150
RefSeq - XM_015277944
RefSeq - XM_015277943
RefSeq - NM_001079479
RefSeq Peptide - NP_001072947
RefSeq Peptide - NP_001265079
swissprot - A0A1D5PGT5
swissprot - Q5ZMA8
swissprot - A0A1D5PFT4
swissprot - A0A1D5PX83
Ensembl - ENSGALG00000015119
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ss18ENSDARG00000002970Danio rerio
 SS18ENSG00000141380Homo sapiens
 Ss18ENSMUSG00000037013Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ENSGALG0000000514562
SS18L2 / SS18 like 2 / Q9D174* / Q9UHA2* / SS18, nBAF chromatin remodeling complex subunit like 2*ENSGALG000000049439


Protein motifs (from Interpro)
Interpro ID Name
 IPR007726  SS18 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000226 microtubule cytoskeleton organization IEA
 biological_processGO:0000902 cell morphogenesis IEA
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0042493 response to drug IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048013 ephrin receptor signaling pathway IEA
 biological_processGO:0097150 neuronal stem cell population maintenance IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005881 cytoplasmic microtubule IEA
 cellular_componentGO:0071564 npBAF complex IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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