ENSGALG00000015568


Gallus gallus

Features
Gene ID: ENSGALG00000015568
  
Biological name :SH3TC1
  
Synonyms : SH3 domain and tetratricopeptide repeats 1 / SH3TC1
  
Possible biological names infered from orthology : Q8TE82
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 81396418
Gene end: 81418574
  
Corresponding Affymetrix probe sets: Gga.19541.1.A1_at (Chicken Array)   Gga.19541.1.S1_s_at (Chicken Array)   GgaAffx.24711.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000025054
NCBI entrez gene - 422867     See in Manteia.
RefSeq - XM_015285844
swissprot - F1NC54
Ensembl - ENSGALG00000015568
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SH3TC1ENSDARG00000077330Danio rerio
 Q8TE82ENSG00000125089Homo sapiens
 Sh3tc1ENSMUSG00000036553Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q80VA5* / Q8TF17* / SH3TC2* / SH3 domain and tetratricopeptide repeats 2* / SH3 domain and tetratricopeptide repeat-containing protein 2 *ENSGALG0000004368819
Q80VA5* / Q8TF17* / SH3TC2* / SH3 domain and tetratricopeptide repeats 2* / SH3 domain and tetratricopeptide repeat-containing protein 2 *ENSGALG000000445767


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr