ENSMUSG00000036553


Mus musculus

Features
Gene ID: ENSMUSG00000036553
  
Biological name :Sh3tc1
  
Synonyms : SH3 domain and tetratricopeptide repeats 1 / Sh3tc1
  
Possible biological names infered from orthology : Q8TE82
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: B3
Gene start: 35697180
Gene end: 35739987
  
Corresponding Affymetrix probe sets: 10529497 (MoGene1.0st)   1427619_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000119811
Ensembl peptide - ENSMUSP00000070610
Ensembl peptide - ENSMUSP00000115376
Ensembl peptide - ENSMUSP00000123034
Ensembl peptide - ENSMUSP00000144175
NCBI entrez gene - 231147     See in Manteia.
MGI - MGI:2678949
RefSeq - XM_006503905
RefSeq - NM_194344
RefSeq - XM_006503903
RefSeq - XM_006503904
RefSeq Peptide - NP_919325
swissprot - F6QD49
swissprot - F6UWL1
swissprot - G3X9F6
swissprot - F6U4F1
Ensembl - ENSMUSG00000036553
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SH3TC1ENSDARG00000077330Danio rerio
 SH3TC1ENSGALG00000015568Gallus gallus
 Q8TE82ENSG00000125089Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q80VA5 / Sh3tc2 / SH3 domain and tetratricopeptide repeat-containing protein 2 / Q8TF17* / SH3 domain and tetratricopeptide repeats 2*ENSMUSG0000004562928


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR019734  Tetratricopeptide repeat
 IPR036028  SH3-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr