ENSG00000125089


Homo sapiens

Features
Gene ID: ENSG00000125089
  
Biological name :SH3TC1
  
Synonyms : Q8TE82 / SH3 domain and tetratricopeptide repeats 1 / SH3TC1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: p16.1
Gene start: 8182072
Gene end: 8241803
  
Corresponding Affymetrix probe sets: 219256_s_at (Human Genome U133 Plus 2.0 Array)   229832_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000425079
Ensembl peptide - ENSP00000425970
Ensembl peptide - ENSP00000475411
Ensembl peptide - ENSP00000427316
Ensembl peptide - ENSP00000426035
Ensembl peptide - ENSP00000245105
Ensembl peptide - ENSP00000371961
Ensembl peptide - ENSP00000390311
Ensembl peptide - ENSP00000422315
Ensembl peptide - ENSP00000423583
NCBI entrez gene - 54436     See in Manteia.
RefSeq - XM_017008302
RefSeq - NM_001318480
RefSeq - NM_018986
RefSeq - XM_006713889
RefSeq - XM_006713891
RefSeq - XM_011513488
RefSeq - XM_011513489
RefSeq - XM_017008300
RefSeq - XM_017008301
RefSeq Peptide - NP_001305409
RefSeq Peptide - NP_061859
swissprot - Q6NVH2
swissprot - Q8TE82
swissprot - E7EQR1
swissprot - D6RI07
swissprot - D6REB6
swissprot - H0Y9A4
swissprot - H0YA34
swissprot - H0YAJ7
swissprot - U3KQ04
swissprot - D6RC98
Ensembl - ENSG00000125089
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SH3TC1ENSDARG00000077330Danio rerio
 SH3TC1ENSGALG00000015568Gallus gallus
 Sh3tc1ENSMUSG00000036553Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8TF17 / SH3TC2 / SH3 domain and tetratricopeptide repeats 2ENSG0000016924730


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR019734  Tetratricopeptide repeat
 IPR036028  SH3-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr